MESCA012239 (Megaselia scalaris)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 MESCA012239 T331263_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SoxN
M03976_2.00 		Drosophila melanogaster
VYGHACARTNN
NNAYTGTDCRB		 SELEX
Nitta et al.(2015)
SoxN_1 		0.364 1.000
SoxN
M03977_2.00 		Drosophila melanogaster
NCAATNVCATTGN
NCAATGBNATTGN		 SELEX
Nitta et al.(2015)
SoxN_2 		0.364 1.000
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MESCA012239-PA Sox 1 42

Links

Other Sox family TFs
Other Megaselia scalaris TFs

235 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N 0.707
Ogr08337 Ophisaurus gracilis Ogr08337 N 0.680
sox-2 Caenorhabditis elegans WBGene00004949 I 0.680
SMU15030186 Schmidtea mediterranea SMU15030186 N 0.671
GPLIN_000970900 Globodera pallida GPLIN_000970900 N 0.669
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.664
Brh_R004116 Buceros rhinoceros Brh_R004116 N 0.646
LDEC019307 Leptinotarsa decemlineata LDEC019307 N 0.635
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.634
AMEC000538 Anopheles melas AMEC000538 I 0.634
SOX2 Felis catus ENSFCAG00000029205 I 0.634
SOX2 Procavia capensis ENSPCAG00000003690 I 0.634
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N 0.631
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N 0.631
PPAI003639 Phlebotomus papatasi PPAI003639 N 0.629
AMEM007694 Anopheles merus AMEM007694 N 0.628
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.607
Myotis_brandtii_SOX2_10019709 Myotis brandtii Myotis_brandtii_SOX2_10019709 I 0.607
SPER_0001952401 Spirometra erinaceieuropaei SPER_0001952401 N 0.603
SPER_0001708101 Spirometra erinaceieuropaei SPER_0001708101 N 0.603
ENSSTOG00000011011 Ictidomys tridecemlineatus ENSSTOG00000011011 I 0.601
ACOM029353 Anopheles coluzzii ACOM029353 I 0.599
ENSPANG00000005859 Papio anubis ENSPANG00000005859 I 0.594
TRE_0000259001 Trichobilharzia regenti TRE_0000259001 N 0.588
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N 0.581
MESCA006364 Megaselia scalaris MESCA006364 N 0.577
RPRC001038 Rhodnius prolixus RPRC001038 N 0.577
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N 0.573
ENSOARG00000000906 Ovis aries ENSOARG00000000906 I 0.565
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N 0.564
BGLB010902 Biomphalaria glabrata BGLB010902 N 0.563
SOX8 Equus caballus ENSECAG00000016320 I 0.560
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I 0.559
UCREL1_749 Eutypa lata UCREL1_749 N 0.554
AMIN009302 Anopheles minimus AMIN009302 N 0.552
L798_12046 Zootermopsis nevadensis L798_12046 N 0.552
ASTEI06408 Anopheles stephensi ASTEI06408 N 0.552
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N 0.552
AEPI003629 Anopheles epiroticus AEPI003629 N 0.552
ADIR005631 Anopheles dirus ADIR005631 N 0.552
CLEC006960 Cimex lectularius CLEC006960 N 0.552
BGIBMGA003081 Bombyx mori BGIBMGA003081 N 0.552
ACUA010594 Anopheles culicifacies ACUA010594 N 0.552
csin108932 Clonorchis sinensis csin108932 I 0.552
AFUN010198 Anopheles funestus AFUN010198 N 0.552
UCREL1_237 Eutypa lata UCREL1_237 N 0.551
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I 0.547
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N 0.547
HMEL002398 Heliconius melpomene HMEL002398 I 0.546
AQUA001261 Anopheles quadriannulatus AQUA001261 N 0.545
ACOM022799 Anopheles coluzzii ACOM022799 N 0.545
AALB009867 Anopheles albimanus AALB009867 N 0.545
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N 0.545
CPIJ012041 Culex quinquefasciatus CPIJ012041 N 0.545
LDEC017494 Leptinotarsa decemlineata LDEC017494 N 0.545
ENSLOCG00000011834 Lepisosteus oculatus ENSLOCG00000011834 I 0.544
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N 0.541
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N 0.541
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N 0.541
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N 0.540
CNM02020 Cryptococcus neoformans CNM02020 N 0.540
LCUP001586 Lucilia cuprina LCUP001586 N 0.540
SOX18 Procavia capensis ENSPCAG00000015663 N 0.535
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N 0.534
GLOINDRAFT_346686 Rhizophagus irregularis GLOINDRAFT_346686 N 0.534
Sox17 Mus musculus ENSMUSG00000025902 D 0.534
SINV19749 Solenopsis invicta SINV19749 N 0.533
UCREL1_469 Eutypa lata UCREL1_469 N 0.531
XP_002935940 Xenopus tropicalis XP_002935940 N 0.529
SOX18 Pan troglodytes ENSPTRG00000030459 I 0.528
SOX17 Sorex araneus ENSSARG00000009573 I 0.528
ENSP00000322568 Macaca fascicularis ENSP00000322568 I 0.528
GLOINDRAFT_25375 Rhizophagus irregularis GLOINDRAFT_25375 N 0.528
PXEA_0000763901 Protopolystoma xenopodis PXEA_0000763901 N 0.526
SOX12 Dasypus novemcinctus ENSDNOG00000044763 N 0.526
Ogr11176 Ophisaurus gracilis Ogr11176 N 0.525
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N 0.525
TTAC_0001064401 Hydatigera taeniaeformis TTAC_0001064401 N 0.525
T265_14506 Opisthorchis viverrini T265_14506 I 0.523
GLOINDRAFT_323774 Rhizophagus irregularis GLOINDRAFT_323774 N 0.522
GPLIN_000596700 Globodera pallida GPLIN_000596700 I 0.521
SCLCIDRAFT_59496 Scleroderma citrinum SCLCIDRAFT_59496 N 0.518
PPAI005428 Phlebotomus papatasi PPAI005428 N 0.518
ENSAMXG00000017231 Astyanax mexicanus ENSAMXG00000017231 I 0.518
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I 0.518
GLOTRDRAFT_8101 Gloeophyllum trabeum GLOTRDRAFT_8101 N 0.518
PFICI_02946 Pestalotiopsis fici PFICI_02946 N 0.517
SMAR007058 Strigamia maritima SMAR007058 N 0.517
PEX1_064750 Penicillium expansum PEX1_064750 N 0.515
RPRC013413 Rhodnius prolixus RPRC013413 N 0.515
CFIO01_04514 Colletotrichum fioriniae CFIO01_04514 N 0.515
PDIP_33190 Penicillium digitatum PDIP_33190 N 0.515
PSEUBRA_SCAF2g02551 Pseudozyma brasiliensis PSEUBRA_SCAF2g02551 N 0.512
K443DRAFT_58201 Laccaria amethystina K443DRAFT_58201 N 0.511
e_gw.60.194.1 Branchiostoma floridae e_gw.60.194.1 N 0.511
LACBIDRAFT_169971 Laccaria bicolor LACBIDRAFT_169971 N 0.511
SOX18 Callithrix jacchus ENSCJAG00000022379 N 0.510
XP_002170844.1 Hydra magnipapillata XP_002170844.1 I 0.509
HHAL000218-PA Halyomorpha halys HHAL000218-PA N 0.506
ACEP10857 Atta cephalotes ACEP10857 N 0.505
HMEL006651 Heliconius melpomene HMEL006651 I 0.504
PLEOSDRAFT_1017219 Pleurotus ostreatus PLEOSDRAFT_1017219 N 0.501
HHAL001583-PA Halyomorpha halys HHAL001583-PA N 0.501
GYMLUDRAFT_143012 Gymnopus luxurians GYMLUDRAFT_143012 N 0.500
PHUM433280 Pediculus humanus PHUM433280 N 0.499
L898_g4879 Steinernema monticolum L898_g4879 N 0.497
ENSTSYG00000001164 Tarsius syrichta ENSTSYG00000001164 I 0.497
YQE_13041 Dendroctonus ponderosae YQE_13041 N 0.496
ACEP25851 Atta cephalotes ACEP25851 N 0.496
AGAP028091 Anopheles gambiae AGAP028091 N 0.496
HHAL001293-PA Halyomorpha halys HHAL001293-PA N 0.496
CPIJ012498 Culex quinquefasciatus CPIJ012498 N 0.496
AATE015714 Anopheles atroparvus AATE015714 N 0.496
CpipJ_CPIJ012498 Culex pipiens CpipJ_CPIJ012498 N 0.496
SINV16572 Solenopsis invicta SINV16572 N 0.496
CAA46605 Xenopus laevis CAA46605 N 0.496
Cmyd_10006594 Chelonia mydas Cmyd_10006594 N 0.494
SOX8 Echinops telfairi ENSETEG00000015470 N 0.494
SOX8 Felis catus ENSFCAG00000004219 N 0.494
SOX8 Microcebus murinus ENSMICG00000011516 I 0.494
Afo_R012388 Aptenodytes forsteri Afo_R012388 N 0.494
SOX8 Callithrix jacchus ENSCJAG00000002684 I 0.494
ENSAPLG00000003216 Anas platyrhynchos ENSAPLG00000003216 N 0.494
ENSTSYG00000006321 Tarsius syrichta ENSTSYG00000006321 I 0.494
Ogr00751 Ophisaurus gracilis Ogr00751 I 0.494
BOTBODRAFT_575781 Botryobasidium botryosum BOTBODRAFT_575781 N 0.493
AAEL000771 Aedes aegypti AAEL000771 N 0.490
DRE_00029 Drechslerella stenobrocha DRE_00029 N 0.490
AFUN009317 Anopheles funestus AFUN009317 N 0.490
H072_9933 Dactylellina haptotyla H072_9933 N 0.490
ADIR009661 Anopheles dirus ADIR009661 N 0.490
AQUA005880 Anopheles quadriannulatus AQUA005880 N 0.490
AMEM002834 Anopheles merus AMEM002834 N 0.490
ACOM026653 Anopheles coluzzii ACOM026653 N 0.490
AMAM023617 Anopheles maculatus AMAM023617 N 0.490
AMEC011653 Anopheles melas AMEC011653 N 0.490
SMAR010125 Strigamia maritima SMAR010125 N 0.490
TC009856 Tribolium castaneum TC009856 N 0.490
ACUA012732 Anopheles culicifacies ACUA012732 N 0.490
AALB009772 Anopheles albimanus AALB009772 N 0.490
AEPI007948 Anopheles epiroticus AEPI007948 N 0.490
ASIS001889 Anopheles sinensis ASIS001889 N 0.490
ASTEI06131 Anopheles stephensi ASTEI06131 N 0.490
LDEC018263 Leptinotarsa decemlineata LDEC018263 N 0.488
YQE_03817 Dendroctonus ponderosae YQE_03817 N 0.488
ENSP00000409273 Macaca fascicularis ENSP00000409273 I 0.487
SOX9 Tupaia belangeri ENSTBEG00000000175 N 0.487
SOX9 Myotis lucifugus ENSMLUG00000030312 I 0.487
Brh_R008736 Buceros rhinoceros Brh_R008736 I 0.487
ENSSHAG00000008406 Sarcophilus harrisii ENSSHAG00000008406 I 0.487
ENSFCAG00000015685 Felis catus ENSFCAG00000015685 I 0.487
SOX10 Echinops telfairi ENSETEG00000012633 I 0.487
SOX9 Echinops telfairi ENSETEG00000020237 I 0.487
ENSAPLG00000013168 Anas platyrhynchos ENSAPLG00000013168 I 0.487
GPLIN_001405800 Globodera pallida GPLIN_001405800 I 0.486
ISCW001638 Ixodes scapularis ISCW001638 N 0.486
AOL_s00081g337 Arthrobotrys oligospora AOL_s00081g337 N 0.484
TELCIR_00631 Teladorsagia circumcincta TELCIR_00631 I 0.483
EFA85451.1 Polysphondylium pallidum EFA85451.1 N 0.480
L798_12049 Zootermopsis nevadensis L798_12049 I 0.479
L798_05432 Zootermopsis nevadensis L798_05432 N 0.478
DAPPUDRAFT_113704 Daphnia pulex DAPPUDRAFT_113704 N 0.475
PEQ_0000549401 Parascaris equorum PEQ_0000549401 N 0.474
AATE016483 Anopheles atroparvus AATE016483 N 0.473
POSPLDRAFT_104634 Postia placenta POSPLDRAFT_104634 N 0.472
PTTG_00444 Puccinia triticina PTTG_00444 N 0.472
AWRI1499_3370 Brettanomyces bruxellensis AWRI1499_3370 N 0.471
M404DRAFT_787968 Pisolithus tinctorius M404DRAFT_787968 N 0.470
PredSwiss_CON1835.1 Pneumocystis carinii PredSwiss_CON1835.1 N 0.470
Hsal_05005--XP_001122373.1_APIME Harpegnathos saltator Hsal_05005--XP_001122373.1_APIME N 0.470
MPER_06248 Moniliophthora perniciosa MPER_06248 N 0.470
PredSwiss_ASS2010_3779.1 Pneumocystis carinii PredSwiss_ASS2010_3779.1 N 0.470
AEPI007652 Anopheles epiroticus AEPI007652 N 0.469
LotgiG143673 Lottia gigantea LotgiG143673 N 0.469
HMEL013676 Heliconius melpomene HMEL013676 N 0.468
D918_08317 Trichuris suis D918_08317 N 0.467
AFUN006689 Anopheles funestus AFUN006689 N 0.466
AMEC007393 Anopheles melas AMEC007393 N 0.466
CpipJ_CPIJ014017 Culex pipiens CpipJ_CPIJ014017 N 0.466
ACUA008827 Anopheles culicifacies ACUA008827 N 0.466
AMAM004028 Anopheles maculatus AMAM004028 N 0.466
AMIN001220 Anopheles minimus AMIN001220 N 0.466
L798_00185 Zootermopsis nevadensis L798_00185 N 0.466
CPIJ014017 Culex quinquefasciatus CPIJ014017 N 0.466
SERLA73DRAFT_139986 Serpula lacrymans SERLA73DRAFT_139986 N 0.464
A1O9_05704 Exophiala aquamarina A1O9_05704 N 0.462
AARA000825 Anopheles arabiensis AARA000825 N 0.462
GLOINDRAFT_31865 Rhizophagus irregularis GLOINDRAFT_31865 N 0.460
SINV24165 Solenopsis invicta SINV24165 N 0.460
POSPLDRAFT_103238 Postia placenta POSPLDRAFT_103238 N 0.457
Gfo_R006305 Geospiza fortis Gfo_R006305 I 0.456
TVAG_390840 Trichomonas vaginalis TVAG_390840 N 0.456
Hsal_04827--XP_001122993.1_APIME Harpegnathos saltator Hsal_04827--XP_001122993.1_APIME N 0.454
sox13.S Xenopus laevis XB-GENE-865496 I 0.453
gw.110.115.1 Branchiostoma floridae gw.110.115.1 N 0.453
PLICRDRAFT_78649 Plicaturopsis crispa PLICRDRAFT_78649 N 0.453
sox5.S Xenopus laevis XB-GENE-865667 I 0.447
MTR_6g048860 Medicago truncatula MTR_6g048860 N 0.447
maker-nMf.1.1.scaf00287-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf00287-augustus-gene-0.13 I 0.446
ACHR008996 Anopheles christyi ACHR008996 N 0.445
OESDEN_19415 Oesophagostomum dentatum OESDEN_19415 N 0.444
ANCDUO_13942 Ancylostoma duodenale ANCDUO_13942 N 0.443
HYDPIDRAFT_51400 Hydnomerulius pinastri HYDPIDRAFT_51400 N 0.443
MESCA006188 Megaselia scalaris MESCA006188 N 0.442
Thaps7519 Thalassiosira pseudonana Thaps7519 N 0.439
MCOS_0000919201 Mesocestoides corti MCOS_0000919201 N 0.438
WALSEDRAFT_27096 Wallemia sebi WALSEDRAFT_27096 N 0.437
CAA46607 Xenopus laevis CAA46607 N 0.437
67303 Aureococcus anophagefferens 67303 N 0.434
CC1G_07924 Coprinopsis cinerea CC1G_07924 N 0.434
GLOINDRAFT_271935 Rhizophagus irregularis GLOINDRAFT_271935 N 0.432
CaO19.1731 Candida albicans CaO19.1731 N 0.430
GB40963 Apis mellifera GB40963 N 0.430
CaO19.9299 Candida albicans CaO19.9299 N 0.430
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.429
Hmg20b Mus musculus ENSMUSG00000020232 D 0.428
BN7_5034 Wickerhamomyces ciferrii BN7_5034 N 0.428
TCNE_0000669501 Toxocara canis TCNE_0000669501 N 0.427
MCINX010139 Melitaea cinxia MCINX010139 N 0.427
GL15054 Drosophila persimilis FBgn0152658 N 0.426
NechaG79025 Fusarium solani NechaG79025 N 0.423
fgenesh1_pg.sca_3_chr4_2_0000426 Nectria haematococca fgenesh1_pg.sca_3_chr4_2_0000426 N 0.423
Alligator_sinensis_CCG005706.1 Alligator sinensis Alligator_sinensis_CCG005706.1 I 0.423
ENSAMXG00000003325 Astyanax mexicanus ENSAMXG00000003325 N 0.422
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N 0.420
GD17533 Drosophila simulans FBgn0189083 N 0.420
PredSwiss_ASS2010_4422.1 Pneumocystis carinii PredSwiss_ASS2010_4422.1 N 0.418
Ca_14341 Cicer arietinum Ca_14341 N 0.418
SMRZ_0002061501 Schistosoma margrebowiei SMRZ_0002061501 N 0.418
ECPE_0001194001 Echinostoma caproni ECPE_0001194001 N 0.418
D915_01276 Fasciola hepatica D915_01276 N 0.418
SCUD_0001126301 Schistosoma curassoni SCUD_0001126301 N 0.418
SMTD_0001685201 Schistosoma mattheei SMTD_0001685201 N 0.418
yakG000714 Bos grunniens yakG000714 N 0.416
WUBG_10398 Wuchereria bancrofti WUBG_10398 N 0.415