XP_002935940 (Xenopus tropicalis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 XP_002935940 T335125_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002935940 Sox 1 67

Links

Other Sox family TFs
Other Xenopus tropicalis TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SOX8 Equus caballus ENSECAG00000016320 I 0.560
ENSLOCG00000011834 Lepisosteus oculatus ENSLOCG00000011834 I 0.560
LDEC019307 Leptinotarsa decemlineata LDEC019307 N 0.557
ENSPANG00000005859 Papio anubis ENSPANG00000005859 I 0.556
Myotis_brandtii_SOX2_10019709 Myotis brandtii Myotis_brandtii_SOX2_10019709 I 0.555
AMEC000538 Anopheles melas AMEC000538 I 0.555
ENSSTOG00000011011 Ictidomys tridecemlineatus ENSSTOG00000011011 I 0.549
SMU15030186 Schmidtea mediterranea SMU15030186 N 0.536
SPER_0001952401 Spirometra erinaceieuropaei SPER_0001952401 N 0.535
SPER_0001708101 Spirometra erinaceieuropaei SPER_0001708101 N 0.535
TRE_0000259001 Trichobilharzia regenti TRE_0000259001 N 0.530
GPLIN_000970900 Globodera pallida GPLIN_000970900 N 0.529
MESCA012239 Megaselia scalaris MESCA012239 I 0.529
Ogr08337 Ophisaurus gracilis Ogr08337 N 0.529
sox-2 Caenorhabditis elegans WBGene00004949 I 0.529
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N 0.529
ENSOARG00000000906 Ovis aries ENSOARG00000000906 I 0.527
HMEL002398 Heliconius melpomene HMEL002398 I 0.523
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N 0.523
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N 0.523
ACOM029353 Anopheles coluzzii ACOM029353 I 0.520
HMEL006651 Heliconius melpomene HMEL006651 I 0.517
ENSP00000322568 Macaca fascicularis ENSP00000322568 I 0.514
PXEA_0000763901 Protopolystoma xenopodis PXEA_0000763901 N 0.506
TTAC_0001064401 Hydatigera taeniaeformis TTAC_0001064401 N 0.502
GPLIN_000596700 Globodera pallida GPLIN_000596700 I 0.499
PPAI003639 Phlebotomus papatasi PPAI003639 N 0.496
csin108932 Clonorchis sinensis csin108932 I 0.490
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.485
L798_12049 Zootermopsis nevadensis L798_12049 I 0.483
AOL_s00081g337 Arthrobotrys oligospora AOL_s00081g337 N 0.482
GLOINDRAFT_323774 Rhizophagus irregularis GLOINDRAFT_323774 N 0.480
CFIO01_04514 Colletotrichum fioriniae CFIO01_04514 N 0.480
PEX1_064750 Penicillium expansum PEX1_064750 N 0.480
PDIP_33190 Penicillium digitatum PDIP_33190 N 0.480
sox5.S Xenopus laevis XB-GENE-865667 I 0.479
Brh_R004116 Buceros rhinoceros Brh_R004116 N 0.478
DRE_00029 Drechslerella stenobrocha DRE_00029 N 0.475
sox13.S Xenopus laevis XB-GENE-865496 I 0.472
PFICI_02946 Pestalotiopsis fici PFICI_02946 N 0.471
H072_9933 Dactylellina haptotyla H072_9933 N 0.467
AMEM007694 Anopheles merus AMEM007694 N 0.466
POSPLDRAFT_104634 Postia placenta POSPLDRAFT_104634 N 0.462
T265_14506 Opisthorchis viverrini T265_14506 I 0.461
CAA46605 Xenopus laevis CAA46605 N 0.460
GYMLUDRAFT_143012 Gymnopus luxurians GYMLUDRAFT_143012 N 0.460
SOX2 Procavia capensis ENSPCAG00000003690 I 0.460
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.460
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.460
SOX2 Felis catus ENSFCAG00000029205 I 0.460
HYDPIDRAFT_51400 Hydnomerulius pinastri HYDPIDRAFT_51400 N 0.456
Gfo_R006305 Geospiza fortis Gfo_R006305 I 0.456
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N 0.455
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N 0.455
GPLIN_001405800 Globodera pallida GPLIN_001405800 I 0.455
UCREL1_469 Eutypa lata UCREL1_469 N 0.454
UCREL1_749 Eutypa lata UCREL1_749 N 0.454
CAA46607 Xenopus laevis CAA46607 N 0.453
XP_002170844.1 Hydra magnipapillata XP_002170844.1 I 0.451
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N 0.450
gw.110.115.1 Branchiostoma floridae gw.110.115.1 N 0.449
RPRC013413 Rhodnius prolixus RPRC013413 N 0.444
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N 0.443
BGLB010902 Biomphalaria glabrata BGLB010902 N 0.437
SERLA73DRAFT_139986 Serpula lacrymans SERLA73DRAFT_139986 N 0.437
A1O9_05704 Exophiala aquamarina A1O9_05704 N 0.437
e_gw.60.194.1 Branchiostoma floridae e_gw.60.194.1 N 0.435
PTTG_00444 Puccinia triticina PTTG_00444 N 0.434
MESCA006188 Megaselia scalaris MESCA006188 N 0.433
RPRC001038 Rhodnius prolixus RPRC001038 N 0.433
MESCA006364 Megaselia scalaris MESCA006364 N 0.433
SOX12 Dasypus novemcinctus ENSDNOG00000044763 N 0.433
PLICRDRAFT_78649 Plicaturopsis crispa PLICRDRAFT_78649 N 0.431
UCREL1_237 Eutypa lata UCREL1_237 N 0.431
maker-nMf.1.1.scaf00287-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf00287-augustus-gene-0.13 I 0.424
GLOINDRAFT_25375 Rhizophagus irregularis GLOINDRAFT_25375 N 0.424
CNM02020 Cryptococcus neoformans CNM02020 N 0.418
GLOINDRAFT_346686 Rhizophagus irregularis GLOINDRAFT_346686 N 0.418
Sox17 Mus musculus ENSMUSG00000025902 D 0.418