HMEL002398 (Heliconius melpomene)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 HMEL002398 T330599_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
cic
M06452_2.00 		Drosophila melanogaster
YYCATTSA
TSAATGRR		 B1H
Zhu et al.(2011)
cic_SANGER_5_FBgn0028386 		0.422 0.812
Cic
M00195_2.00 		Mus musculus
NNTGCTGABN
NVTCAGCANN		 PBM
Badis et al.(2009)
Cic_3454 		0.416 0.812
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HMEL002398-PA Sox 1 48

Links

Other Sox family TFs
Other Heliconius melpomene TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HMEL006651 Heliconius melpomene HMEL006651 I 0.699
LDEC019307 Leptinotarsa decemlineata LDEC019307 N 0.570
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N 0.546
Ogr08337 Ophisaurus gracilis Ogr08337 N 0.546
MESCA012239 Megaselia scalaris MESCA012239 I 0.546
sox-2 Caenorhabditis elegans WBGene00004949 I 0.546
SMU15030186 Schmidtea mediterranea SMU15030186 N 0.546
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N 0.543
GPLIN_000970900 Globodera pallida GPLIN_000970900 N 0.538
SPER_0001708101 Spirometra erinaceieuropaei SPER_0001708101 N 0.535
SPER_0001952401 Spirometra erinaceieuropaei SPER_0001952401 N 0.535
POSPLDRAFT_104634 Postia placenta POSPLDRAFT_104634 N 0.533
UCREL1_469 Eutypa lata UCREL1_469 N 0.531
XP_002935940 Xenopus tropicalis XP_002935940 N 0.523
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.514
PPAI003639 Phlebotomus papatasi PPAI003639 N 0.511
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N 0.511
Myotis_brandtii_SOX2_10019709 Myotis brandtii Myotis_brandtii_SOX2_10019709 I 0.510
AMEC000538 Anopheles melas AMEC000538 I 0.510
TRE_0000259001 Trichobilharzia regenti TRE_0000259001 N 0.505
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N 0.505
SOX8 Equus caballus ENSECAG00000016320 I 0.504
ENSPANG00000005859 Papio anubis ENSPANG00000005859 I 0.504
ENSSTOG00000011011 Ictidomys tridecemlineatus ENSSTOG00000011011 I 0.504
UCREL1_749 Eutypa lata UCREL1_749 N 0.503
SOX2 Felis catus ENSFCAG00000029205 I 0.495
SOX2 Procavia capensis ENSPCAG00000003690 I 0.495
AMEM007694 Anopheles merus AMEM007694 N 0.495
ENSLOCG00000011834 Lepisosteus oculatus ENSLOCG00000011834 I 0.495
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N 0.493
PSEUBRA_SCAF2g02551 Pseudozyma brasiliensis PSEUBRA_SCAF2g02551 N 0.488
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.485
Brh_R004116 Buceros rhinoceros Brh_R004116 N 0.485
LDEC018997 Leptinotarsa decemlineata LDEC018997 I 0.484
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N 0.483
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.477
PDIP_33190 Penicillium digitatum PDIP_33190 N 0.477
CFIO01_04514 Colletotrichum fioriniae CFIO01_04514 N 0.475
ENSOARG00000000906 Ovis aries ENSOARG00000000906 I 0.475
GLOINDRAFT_323774 Rhizophagus irregularis GLOINDRAFT_323774 N 0.475
ACOM029353 Anopheles coluzzii ACOM029353 I 0.475
HYDPIDRAFT_51400 Hydnomerulius pinastri HYDPIDRAFT_51400 N 0.472
LACBIDRAFT_333050 Laccaria bicolor LACBIDRAFT_333050 N 0.471
PEX1_064750 Penicillium expansum PEX1_064750 N 0.471
PTTG_00444 Puccinia triticina PTTG_00444 N 0.467
ENSP00000322568 Macaca fascicularis ENSP00000322568 I 0.464
csin108932 Clonorchis sinensis csin108932 I 0.462
PFICI_02946 Pestalotiopsis fici PFICI_02946 N 0.461
RPRC001038 Rhodnius prolixus RPRC001038 N 0.460
MESCA006364 Megaselia scalaris MESCA006364 N 0.460
SERLA73DRAFT_139986 Serpula lacrymans SERLA73DRAFT_139986 N 0.458
A1O9_05704 Exophiala aquamarina A1O9_05704 N 0.455
TTAC_0001064401 Hydatigera taeniaeformis TTAC_0001064401 N 0.454
PXEA_0000763901 Protopolystoma xenopodis PXEA_0000763901 N 0.454
GLOINDRAFT_346686 Rhizophagus irregularis GLOINDRAFT_346686 N 0.454
GLOINDRAFT_25375 Rhizophagus irregularis GLOINDRAFT_25375 N 0.452
UCREL1_237 Eutypa lata UCREL1_237 N 0.452
Hsal_05005--XP_001122373.1_APIME Harpegnathos saltator Hsal_05005--XP_001122373.1_APIME N 0.449
Thaps7519 Thalassiosira pseudonana Thaps7519 N 0.448
SPU_023037 Strongylocentrotus purpuratus SPU_023037 I 0.447
MTR_6g048860 Medicago truncatula MTR_6g048860 N 0.447
GPUH_0001970101 Gongylonema pulchrum GPUH_0001970101 I 0.445
GYMLUDRAFT_143012 Gymnopus luxurians GYMLUDRAFT_143012 N 0.445
e_gw.60.194.1 Branchiostoma floridae e_gw.60.194.1 N 0.444
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N 0.442
BGLB010902 Biomphalaria glabrata BGLB010902 N 0.442
GPLIN_000596700 Globodera pallida GPLIN_000596700 I 0.441
CNM02020 Cryptococcus neoformans CNM02020 N 0.441
SOX12 Dasypus novemcinctus ENSDNOG00000044763 N 0.439
T265_14506 Opisthorchis viverrini T265_14506 I 0.434
H072_9933 Dactylellina haptotyla H072_9933 N 0.432
AOL_s00081g337 Arthrobotrys oligospora AOL_s00081g337 N 0.432
DRE_00029 Drechslerella stenobrocha DRE_00029 N 0.432
GPLIN_000530400 Globodera pallida GPLIN_000530400 N 0.431
AMEC010127 Anopheles melas AMEC010127 I 0.430
MCINX015089 Melitaea cinxia MCINX015089 I 0.430
AARA001217 Anopheles arabiensis AARA001217 I 0.430
KGM_16941 Danaus plexippus KGM_16941 I 0.430
AMAM017484 Anopheles maculatus AMAM017484 I 0.430
AFAF009600 Anopheles farauti AFAF009600 I 0.430
AFUN006011 Anopheles funestus AFUN006011 I 0.430
CpipJ_CPIJ012202 Culex pipiens CpipJ_CPIJ012202 I 0.430
ADAC008993 Anopheles darlingi ADAC008993 I 0.430
AMEM005678 Anopheles merus AMEM005678 I 0.430
AQUA008168 Anopheles quadriannulatus AQUA008168 I 0.430
CPIJ012202 Culex quinquefasciatus CPIJ012202 I 0.430
ADIR003322 Anopheles dirus ADIR003322 I 0.430
ACUA015009 Anopheles culicifacies ACUA015009 I 0.430
ACHR006446 Anopheles christyi ACHR006446 I 0.430
Cflo_01544--XP_624175.2_APIME Camponotus floridanus Cflo_01544--XP_624175.2_APIME I 0.430
ASTEI00261 Anopheles stephensi ASTEI00261 I 0.430
AEPI005675 Anopheles epiroticus AEPI005675 I 0.430
AMIN003810 Anopheles minimus AMIN003810 I 0.430
AGAP013411 Anopheles gambiae AGAP013411 I 0.430
AALB003439 Anopheles albimanus AALB003439 I 0.430
GPLIN_000066100 Globodera pallida GPLIN_000066100 N 0.429
BGIBMGA010263 Bombyx mori BGIBMGA010263 I 0.428
gw.110.115.1 Branchiostoma floridae gw.110.115.1 N 0.424
SMAR009315 Strigamia maritima SMAR009315 I 0.423
TC004697 Tribolium castaneum TC004697 I 0.423
SPU_025292 Strongylocentrotus purpuratus SPU_025292 I 0.423
NV10910 Nasonia vitripennis NV10910 I 0.423
GB43462 Apis mellifera GB43462 I 0.423
ACYPI004663 Acyrthosiphon pisum ACYPI004663 I 0.423
CLEC003268 Cimex lectularius CLEC003268 I 0.423
ACEP18843 Atta cephalotes ACEP18843 I 0.423
GG23823 Drosophila erecta FBgn0115962 I 0.422
GD19345 Drosophila simulans FBgn0190847 I 0.422
GK10919 Drosophila willistoni FBgn0212930 I 0.422
LCUP009387 Lucilia cuprina LCUP009387 I 0.422
GF17645 Drosophila ananassae FBgn0094663 I 0.422
AAEL004381 Aedes aegypti AAEL004381 I 0.422
GE25659 Drosophila yakuba FBgn0242721 I 0.422
MDOA004531 Musca domestica MDOA004531 I 0.422
GM23104 Drosophila sechellia FBgn0177972 I 0.422
cic Drosophila melanogaster FBgn0262582 D 0.422
PLICRDRAFT_78649 Plicaturopsis crispa PLICRDRAFT_78649 N 0.420
CLEC006960 Cimex lectularius CLEC006960 N 0.420
L798_12046 Zootermopsis nevadensis L798_12046 N 0.420
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N 0.420
ACEP10857 Atta cephalotes ACEP10857 N 0.420
BGIBMGA003081 Bombyx mori BGIBMGA003081 N 0.420
AFUN010198 Anopheles funestus AFUN010198 N 0.420
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I 0.420
ADIR005631 Anopheles dirus ADIR005631 N 0.420
ACUA010594 Anopheles culicifacies ACUA010594 N 0.420
AEPI003629 Anopheles epiroticus AEPI003629 N 0.420
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I 0.420
ASTEI06408 Anopheles stephensi ASTEI06408 N 0.420
AMIN009302 Anopheles minimus AMIN009302 N 0.420
RPRC001090 Rhodnius prolixus RPRC001090 I 0.417
HHAL000065-PA Halyomorpha halys HHAL000065-PA I 0.417
CapteG39126 Capitella teleta CapteG39126 I 0.416
LLOJ007756 Lutzomyia longipalpis LLOJ007756 I 0.416
cic Xenopus tropicalis XB-GENE-6467430 I 0.416
CGI_10015746 Crassostrea gigas CGI_10015746 I 0.416
Alligator_sinensis_CCG005631.1 Alligator sinensis Alligator_sinensis_CCG005631.1 I 0.416
ENSSTOG00000000852 Ictidomys tridecemlineatus ENSSTOG00000000852 I 0.416
ENSMLUG00000016650 Myotis lucifugus ENSMLUG00000016650 I 0.416
CIC Sus scrofa ENSSSCG00000003030 I 0.416
Cic Rattus norvegicus ENSRNOG00000056118 I 0.416
CIC Pteropus vampyrus ENSPVAG00000016806 I 0.416
CIC Tupaia belangeri ENSTBEG00000009044 I 0.416
CIC Tetraodon nigroviridis ENSTNIG00000003521 I 0.416
ENSMEUG00000016625 Macropus eugenii ENSMEUG00000016625 I 0.416
ENSLACG00000002764 Latimeria chalumnae ENSLACG00000002764 I 0.416
ENSMICG00000015176 Microcebus murinus ENSMICG00000015176 I 0.416
CIC Tursiops truncatus ENSTTRG00000013873 I 0.416
CIC Takifugu rubripes ENSTRUG00000007193 I 0.416
CIC Pan troglodytes ENSPTRG00000011051 I 0.416
ENSPPYG00000010041 Pongo abelii ENSPPYG00000010041 I 0.416
CIC Otolemur garnettii ENSOGAG00000003964 I 0.416
ENSONIG00000013108 Oreochromis niloticus ENSONIG00000013108 I 0.416
ENSOCUG00000006458 Oryctolagus cuniculus ENSOCUG00000006458 I 0.416
ENSOARG00000007985 Ovis aries ENSOARG00000007985 I 0.416
Cic Mus musculus ENSMUSG00000005442 D 0.416
cicb Oryzias latipes ENSORLG00000013259 I 0.416
ENSMPUG00000007557 Mustela putorius furo ENSMPUG00000007557 I 0.416
ENSPFOG00000016231 Poecilia formosa ENSPFOG00000016231 I 0.416
ENSPFOG00000000116 Poecilia formosa ENSPFOG00000000116 I 0.416
ENSMMUG00000012174 Macaca mulatta ENSMMUG00000012174 I 0.416
ENSPANG00000009039 Papio anubis ENSPANG00000009039 I 0.416
ENSGMOG00000005167 Gadus morhua ENSGMOG00000005167 I 0.416
CIC Gorilla gorilla ENSGGOG00000000192 I 0.416
CIC Canis familiaris ENSCAFG00000004858 I 0.416
ENSBTAG00000019785 Bos taurus ENSBTAG00000019785 I 0.416
Myotis_brandtii_Cic_10007129 Myotis brandtii Myotis_brandtii_Cic_10007129 I 0.416
ENSP00000160740 Macaca fascicularis ENSP00000160740 I 0.416
ENSP00000160740-D1 Bos grunniens ENSP00000160740-D1 I 0.416
Ogr10275 Ophisaurus gracilis Ogr10275 I 0.416
Pvit_02876 Pogona vitticeps Pvit_02876 I 0.416
Ocbimv22037932m.g Octopus bimaculoides Ocbimv22037932m.g I 0.416
gw.46.292.1 Branchiostoma floridae gw.46.292.1 I 0.416
gw.448.64.1 Branchiostoma floridae gw.448.64.1 I 0.416
ENSAMXG00000018358 Astyanax mexicanus ENSAMXG00000018358 I 0.416
Cmyd_10001800 Chelonia mydas Cmyd_10001800 I 0.416
ENSCING00000007655 Ciona intestinalis ENSCING00000007655 I 0.416
ENSFCAG00000012737 Felis catus ENSFCAG00000012737 I 0.416
CIC Echinops telfairi ENSETEG00000017271 I 0.416
PHUM079880 Pediculus humanus PHUM079880 I 0.416
CIC Homo sapiens ENSG00000079432 I 0.416
cicb Gasterosteus aculeatus ENSGACG00000009452 I 0.416
CIC Equus caballus ENSECAG00000011342 I 0.416
Cic Dipodomys ordii ENSDORG00000008822 I 0.416
ENSNLEG00000010614 Nomascus leucogenys ENSNLEG00000010614 I 0.416
CIC Callithrix jacchus ENSCJAG00000012847 I 0.416
ENSCPOG00000004391 Cavia porcellus ENSCPOG00000004391 I 0.416
CIC Dasypus novemcinctus ENSDNOG00000047657 I 0.416
Sakowv30042695m.g Saccoglossus kowalevskii Sakowv30042695m.g I 0.416