GPLIN_000530400 (Globodera pallida)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 GPLIN_000530400 T336337_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000530400 Sox 131 175

Links

Other Sox family TFs
Other Globodera pallida TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CaO19.400 Candida albicans CaO19.400 N 0.501
CaO19.8030 Candida albicans CaO19.8030 N 0.501
GPLIN_000066100 Globodera pallida GPLIN_000066100 N 0.480
TTAC_0000824601 Hydatigera taeniaeformis TTAC_0000824601 N 0.454
WUBG_10398 Wuchereria bancrofti WUBG_10398 N 0.441
HMEL002398 Heliconius melpomene HMEL002398 I 0.431
ubtfl Danio rerio ENSDARG00000038780 N 0.431
SapurV1A.0368s0010 Salix purpurea SapurV1A.0368s0010 N 0.430
DICVIV_04576 Dictyocaulus viviparus DICVIV_04576 N 0.430
EMIHUDRAFT_108701 Emiliania huxleyi EMIHUDRAFT_108701 N 0.426
SERLA73DRAFT_158240 Serpula lacrymans SERLA73DRAFT_158240 N 0.425
EMIHUDRAFT_107556 Emiliania huxleyi EMIHUDRAFT_107556 N 0.424
ANCDUO_13942 Ancylostoma duodenale ANCDUO_13942 N 0.423
fgenesh1_pg.sca_3_chr4_2_0000426 Nectria haematococca fgenesh1_pg.sca_3_chr4_2_0000426 N 0.420
NechaG79025 Fusarium solani NechaG79025 N 0.420
YQE_13041 Dendroctonus ponderosae YQE_13041 N 0.420
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N 0.418
Mycgr3G89562 Zymoseptoria tritici Mycgr3G89562 N 0.418
fgenesh1_pg.C_chr_1000979 Mycosphaerella graminicola fgenesh1_pg.C_chr_1000979 N 0.418
POSPLDRAFT_103238 Postia placenta POSPLDRAFT_103238 N 0.417
OESDEN_19415 Oesophagostomum dentatum OESDEN_19415 N 0.416