PGSC0003DMG402018896 (Solanum tuberosum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PGSC0003DMG402018896 T331860_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400048639 Sox 157 224

Links

Other Sox family TFs
Other Solanum tuberosum TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.F01991 Eucalyptus grandis Eucgr.F01991 N 0.537
POPTR_0017s08230 Populus trichocarpa POPTR_0017s08230 N 0.534
PDK_20s1400562g001 Phoenix dactylifera PDK_20s1400562g001 N 0.528
chr5.CM0260.560.nd Lotus japonicus chr5.CM0260.560.nd N 0.523
Traes_6DS_C7F653F0F Triticum aestivum Traes_6DS_C7F653F0F N 0.516
Traes_6BS_165C5AFD9 Triticum aestivum Traes_6BS_165C5AFD9 N 0.516
F775_20402 Aegilops tauschii F775_20402 N 0.516
MLOC_42821 Hordeum vulgare MLOC_42821 I 0.516
GLYMA10G44031 Glycine max GLYMA10G44031 N 0.449
SPU_005372 Strongylocentrotus purpuratus SPU_005372 N 0.436
PDK_20s1331851g001 Phoenix dactylifera PDK_20s1331851g001 N 0.435