MLOC_42821 (Hordeum vulgare)
ARID/BRIGHT,Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID)
PF00505 (HMG_box) 		IPR001606
IPR000910 		MLOC_42821 T017040_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.434 0.329
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_42821.1 ARID/BRIGHT 56 141
MLOC_42821.1 Sox 266 333
MLOC_42821.2 ARID/BRIGHT 56 141
MLOC_42821.3 ARID/BRIGHT 56 141
MLOC_42821.3 Sox 266 333
MLOC_42821.4 Sox 54 121

Links

Other ARID/BRIGHT,Sox family TFs
Other Hordeum vulgare TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_6AS_A465E600A Triticum aestivum Traes_6AS_A465E600A N 0.974
BRADI3G43310 Brachypodium distachyon BRADI3G43310 N 0.948
Si017168m.g Setaria italica Si017168m.g N 0.928
Pavir.Aa02269 Panicum virgatum Pavir.Aa02269 N 0.922
OPUNC02G14620 Oryza punctata OPUNC02G14620 N 0.915
Sb04g017850 Sorghum bicolor Sb04g017850 N 0.915
Pavir.Ab01767 Panicum virgatum Pavir.Ab01767 N 0.908
GRMZM2G024976 Zea mays GRMZM2G024976 N 0.908
OS02G0469900 Oryza sativa OS02G0469900 N 0.902
OLONG_013998 Oryza longistaminata OLONG_013998 N 0.902
OMERI02G15910 Oryza meridionalis OMERI02G15910 N 0.902
ORUFI02G16870 Oryza rufipogon ORUFI02G16870 N 0.902
BGIOSGA008185 Oryza indica BGIOSGA008185 N 0.902
OBART02G16380 Oryza barthii OBART02G16380 N 0.902
OGLUM02G16420 Oryza glumaepatula OGLUM02G16420 N 0.902
ONIVA02G17640 Oryza nivara ONIVA02G17640 N 0.837
OB0121G10030 Oryza brachyantha OB0121G10030 N 0.837
LPERR02G13140 Leersia perrieri LPERR02G13140 I 0.837
TRIUR3_18598 Triticum urartu TRIUR3_18598 N 0.797
Traes_6BS_165C5AFD9 Triticum aestivum Traes_6BS_165C5AFD9 N 0.737
GSMUA_Achr8G28470_001 Musa acuminata GSMUA_Achr8G28470_001 I 0.706
F775_20402 Aegilops tauschii F775_20402 N 0.703
Traes_6DS_C7F653F0F Triticum aestivum Traes_6DS_C7F653F0F N 0.703
POPTR_0017s08230 Populus trichocarpa POPTR_0017s08230 N 0.594
PDK_20s1400562g001 Phoenix dactylifera PDK_20s1400562g001 N 0.577
orange1.1g029808m.g Citrus sinensis orange1.1g029808m.g I 0.522
PGSC0003DMG402018896 Solanum tuberosum PGSC0003DMG402018896 N 0.516
chr5.CM0260.560.nd Lotus japonicus chr5.CM0260.560.nd N 0.510
chr5.CM0260.670.nd Lotus japonicus chr5.CM0260.670.nd N 0.509
Eucgr.F01991 Eucalyptus grandis Eucgr.F01991 N 0.496
PDK_20s1331851g001 Phoenix dactylifera PDK_20s1331851g001 N 0.491
ENSSTOG00000002820 Ictidomys tridecemlineatus ENSSTOG00000002820 I 0.466
ARID3C Tupaia belangeri ENSTBEG00000004554 I 0.466
ARID3C Sus scrofa ENSSSCG00000010971 I 0.466
ENSP00000368189 Macaca fascicularis ENSP00000368189 I 0.466
ARID3C Tursiops truncatus ENSTTRG00000005673 I 0.466
ARID3C Felis catus ENSFCAG00000003156 I 0.466
Arid3c Dipodomys ordii ENSDORG00000001723 I 0.466
ARID3C Homo sapiens ENSG00000205143 I 0.466
ARID3C Gorilla gorilla ENSGGOG00000002920 I 0.466
ARID3C Macaca mulatta ENSMMUG00000020786 I 0.466
ARID3C Loxodonta africana ENSLAFG00000017911 I 0.466
ARID3C Dasypus novemcinctus ENSDNOG00000030859 I 0.466
ENSCSAG00000010149 Chlorocebus sabaeus ENSCSAG00000010149 I 0.466
ARID3C Bos taurus ENSBTAG00000025792 I 0.466
ENSAMEG00000014585 Ailuropoda melanoleuca ENSAMEG00000014585 I 0.466
ARID3C Canis familiaris ENSCAFG00000024873 I 0.466
ARID3C Choloepus hoffmanni ENSCHOG00000011584 I 0.466
ARID3C Cavia porcellus ENSCPOG00000001541 I 0.466
ARID3C Callithrix jacchus ENSCJAG00000008754 I 0.466
ENSMPUG00000004275 Mustela putorius furo ENSMPUG00000004275 I 0.466
ENSMICG00000002379 Microcebus murinus ENSMICG00000002379 I 0.466
ARID3C Otolemur garnettii ENSOGAG00000008253 I 0.466
ARID3C Ochotona princeps ENSOPRG00000009210 I 0.466
ENSPANG00000025316 Papio anubis ENSPANG00000025316 I 0.466
Arid3c Mus musculus ENSMUSG00000066224 I 0.466
ARID3C Oryctolagus cuniculus ENSOCUG00000000361 I 0.466
ENSOARG00000009192 Ovis aries ENSOARG00000009192 I 0.466
ARID3C Pan troglodytes ENSPTRG00000029286 I 0.466
ENSPPYG00000020014 Pongo abelii ENSPPYG00000020014 I 0.466
Arid3c Rattus norvegicus ENSRNOG00000013416 I 0.466
ENSNLEG00000004860 Nomascus leucogenys ENSNLEG00000004860 I 0.466
ARID3C Pteropus vampyrus ENSPVAG00000014819 I 0.466
HelroG64754 Helobdella robusta HelroG64754 I 0.453
ENSOANG00000010382 Ornithorhynchus anatinus ENSOANG00000010382 I 0.453
SapurV1A.0338s0260 Salix purpurea SapurV1A.0338s0260 I 0.452
EFA85631.1 Polysphondylium pallidum EFA85631.1 I 0.447
ARID3B Echinops telfairi ENSETEG00000000100 I 0.444
ENSDNOG00000042496 Dasypus novemcinctus ENSDNOG00000042496 I 0.444
ENSMEUG00000002417 Macropus eugenii ENSMEUG00000002417 I 0.444
ENSSHAG00000017446 Sarcophilus harrisii ENSSHAG00000017446 I 0.444
ARID3B Loxodonta africana ENSLAFG00000002987 I 0.444
SCUD_0001335501 Schistosoma curassoni SCUD_0001335501 I 0.442
A_05913 Schistosoma haematobium A_05913 I 0.442
Sjc_0028570 Schistosoma japonicum Sjc_0028570 I 0.442
csin102087 Clonorchis sinensis csin102087 I 0.442
D915_07576 Fasciola hepatica D915_07576 I 0.442
T265_04110 Opisthorchis viverrini T265_04110 I 0.442
gw.107.92.1 Branchiostoma floridae gw.107.92.1 I 0.442
Smp_135110 Schistosoma mansoni Smp_135110 I 0.442
MDP0000198823 Malus domestica MDP0000198823 I 0.441
Cla007529 Citrullus lanatus Cla007529 I 0.438
Cla016376 Citrullus lanatus Cla016376 I 0.436
TsM_000440000 Taenia solium TsM_000440000 I 0.434
SMU15014499 Schmidtea mediterranea SMU15014499 I 0.434
DDB_G0275333 Dictyostelium discoideum DDB_G0275333 D 0.434
EmuJ_000964700 Echinococcus multilocularis EmuJ_000964700 I 0.434
ECANG7_05318 Echinococcus canadensis ECANG7_05318 I 0.434
HmN_000157800 Hymenolepis microstoma HmN_000157800 I 0.434
RSKR_0000557500 Rhabditophanes kr3021 RSKR_0000557500 I 0.433
BTMF_0000256101 Brugia timori BTMF_0000256101 N 0.433
ARID3C Myotis lucifugus ENSMLUG00000022582 I 0.430
ENSECAG00000019080 Equus caballus ENSECAG00000019080 I 0.430
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N 0.429
HelroG122964 Helobdella robusta HelroG122964 I 0.428
HelroG126316 Helobdella robusta HelroG126316 I 0.428
Ocbimv22026349m.g Octopus bimaculoides Ocbimv22026349m.g I 0.428
CapteG64285 Capitella teleta CapteG64285 I 0.428
Sakowv30034340m.g Saccoglossus kowalevskii Sakowv30034340m.g I 0.428
LotgiG93934 Lottia gigantea LotgiG93934 I 0.428
orange1.1g020305m.g Citrus sinensis orange1.1g020305m.g I 0.427
OFLC_0001222801 Onchocerca flexuosa OFLC_0001222801 N 0.421
nOo.2.0.1.g12207 Onchocerca ochengi nOo.2.0.1.g12207 N 0.421
WBGene00236865 Onchocerca volvulus WBGene00236865 N 0.421
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N 0.418