LPERR02G13140 (Leersia perrieri)
ARID/BRIGHT,Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID)
PF00505 (HMG_box) 		IPR001606
IPR000910 		LPERR02G13140 T017038_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.429 0.376
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR02G13140.1 ARID/BRIGHT 80 165
LPERR02G13140.1 Sox 286 353
LPERR02G13140.2 ARID/BRIGHT 80 165

Links

Other ARID/BRIGHT,Sox family TFs
Other Leersia perrieri TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA02G17640 Oryza nivara ONIVA02G17640 N 0.877
OB0121G10030 Oryza brachyantha OB0121G10030 N 0.877
OPUNC02G14620 Oryza punctata OPUNC02G14620 N 0.863
OS02G0469900 Oryza sativa OS02G0469900 N 0.850
OGLUM02G16420 Oryza glumaepatula OGLUM02G16420 N 0.850
OBART02G16380 Oryza barthii OBART02G16380 N 0.850
BGIOSGA008185 Oryza indica BGIOSGA008185 N 0.850
OLONG_013998 Oryza longistaminata OLONG_013998 N 0.850
OMERI02G15910 Oryza meridionalis OMERI02G15910 N 0.850
ORUFI02G16870 Oryza rufipogon ORUFI02G16870 N 0.850
Traes_6AS_A465E600A Triticum aestivum Traes_6AS_A465E600A N 0.843
BRADI3G43310 Brachypodium distachyon BRADI3G43310 N 0.843
MLOC_42821 Hordeum vulgare MLOC_42821 I 0.837
Sb04g017850 Sorghum bicolor Sb04g017850 N 0.824
Pavir.Ab01767 Panicum virgatum Pavir.Ab01767 N 0.817
Si017168m.g Setaria italica Si017168m.g N 0.810
GRMZM2G024976 Zea mays GRMZM2G024976 N 0.810
Pavir.Aa02269 Panicum virgatum Pavir.Aa02269 N 0.810
TRIUR3_18598 Triticum urartu TRIUR3_18598 N 0.705
SapurV1A.0338s0260 Salix purpurea SapurV1A.0338s0260 I 0.465
orange1.1g029808m.g Citrus sinensis orange1.1g029808m.g I 0.460
EFA85631.1 Polysphondylium pallidum EFA85631.1 I 0.442
SROB_0000258301 Schistosoma rodhaini SROB_0000258301 I 0.438
T265_04110 Opisthorchis viverrini T265_04110 I 0.437
D915_07576 Fasciola hepatica D915_07576 I 0.437
Sjc_0028570 Schistosoma japonicum Sjc_0028570 I 0.437
gw.107.92.1 Branchiostoma floridae gw.107.92.1 I 0.437
Smp_135110 Schistosoma mansoni Smp_135110 I 0.437
NEMVEDRAFT_v1g91926 Nematostella vectensis NEMVEDRAFT_v1g91926 I 0.437
SCUD_0001335501 Schistosoma curassoni SCUD_0001335501 I 0.437
A_05913 Schistosoma haematobium A_05913 I 0.437
csin102087 Clonorchis sinensis csin102087 I 0.437
TsM_000440000 Taenia solium TsM_000440000 I 0.429
DDB_G0275333 Dictyostelium discoideum DDB_G0275333 D 0.429
HmN_000157800 Hymenolepis microstoma HmN_000157800 I 0.429
EmuJ_000964700 Echinococcus multilocularis EmuJ_000964700 I 0.429
SMU15014499 Schmidtea mediterranea SMU15014499 I 0.429
ECANG7_05318 Echinococcus canadensis ECANG7_05318 I 0.429
RSKR_0000557500 Rhabditophanes kr3021 RSKR_0000557500 I 0.428
BGLB003500 Biomphalaria glabrata BGLB003500 I 0.424
HelroG126316 Helobdella robusta HelroG126316 I 0.423
HelroG122964 Helobdella robusta HelroG122964 I 0.423
LotgiG93934 Lottia gigantea LotgiG93934 I 0.423
Ocbimv22026349m.g Octopus bimaculoides Ocbimv22026349m.g I 0.423
Sakowv30034340m.g Saccoglossus kowalevskii Sakowv30034340m.g I 0.423
CapteG64285 Capitella teleta CapteG64285 I 0.423