POPTR_0019s07560 (Populus trichocarpa)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 POPTR_0019s07560 T332142_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0019s07560.1 Sox 70 130

Links

Other Sox family TFs
Other Populus trichocarpa TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0707s0020 Salix purpurea SapurV1A.0707s0020 N 0.638
cassava14219.m1 Manihot esculenta cassava14219.m1 N 0.518
29729.m002338 Ricinus communis 29729.m002338 N 0.496
TCM_045441 Theobroma cacao TCM_045441 N 0.468
evm.TU.supercontig_19.89 Carica papaya evm.TU.supercontig_19.89 N 0.457