cassava14219.m1 (Manihot esculenta)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 cassava14219.m1 T333919_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava14219.m1 Sox 70 129

Links

Other Sox family TFs
Other Manihot esculenta TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29729.m002338 Ricinus communis 29729.m002338 N 0.663
SapurV1A.0707s0020 Salix purpurea SapurV1A.0707s0020 N 0.534
POPTR_0019s07560 Populus trichocarpa POPTR_0019s07560 N 0.518
evm.TU.supercontig_19.89 Carica papaya evm.TU.supercontig_19.89 N 0.499
TCM_045441 Theobroma cacao TCM_045441 N 0.446
Gorai.013G006100 Gossypium raimondii Gorai.013G006100 N 0.445
Lus10000418.g Linum usitatissimum Lus10000418.g N 0.443
PK20108.1 Cannabis sativa PK20108.1 N 0.438