CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PYU1_G005944
(
Pythium ultimum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PYU1_G005944
T332329_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PYU1_T005956
Sox
34
102
PKPFKNAYLHFSTVRRGEVADMYPDWTVQQVSAEVGRQWKALSQHERKPWIELAQFDKARFQTELQQYI
PYU1_T005956
Sox
125
193
PKQPDTAYICYWKSKRMELLSENPDMEPTLVSKEVGRHWKSLSEEERQIWKDMSAQDKLRYQQEVARYQ
PYU1_T005956
Sox
214
280
PKPPKTGFQLFMSHNRESFTLLNMSINEFRVEMSQLWKRLTEEDKSVWYSMAKQDQLRYEAEVNAYK
PYU1_T005956
Sox
310
378
PRLPMTAYHIYLTFKRREIQLHQPRLRHNEVMRQVGLTWKELSAQDREPFLRKAEQDVDRFEKEMEAYL
PYU1_T005956
Sox
431
498
PRRPQTAYNLMYMSKRAEILATYQMSHNECSALCGRMWRQMSDQEREPYHRMALEDKTRYDSEMQEYR
Links
Other
Sox
family TFs
Other
Pythium ultimum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-pir_contig_324-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_324-fgenesh-gene-0.0
N
0.655
fgenesh_scip_prom.28083.971
Phytophthora lateralis
fgenesh_scip_prom.28083.971
N
0.530
F443_04975
Phytophthora parasitica
F443_04975
N
0.519
Physo156165
Phytophthora sojae
Physo156165
N
0.504
PITG_17485
Phytophthora infestans
PITG_17485
N
0.502