hmg-5 (Caenorhabditis elegans)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 WBGene00001975 T333271_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables identical protein binding activity and telomeric DNA binding activity. Involved in mitochondrial DNA metabolic process. Located in chromosome, telomeric region and mitochondrial nucleoid. Is expressed in dorsal nerve cord; head muscle; head neurons; oocyte; and ventral nerve cord. Human ortholog(s) of this gene implicated in Alzheimer's disease; Huntington's disease; Parkinson's disease; amyotrophic lateral sclerosis; and mitochondrial DNA depletion syndrome 15. Orthologous to human TFAM (transcription factor A, mitochondrial). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
F45E4.9 Sox 33 91
F45E4.9 Sox 132 195

Links

Other Sox family TFs
Other Caenorhabditis elegans TFs

Invalid Input OrderBy

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action