YQE_10385 (Dendroctonus ponderosae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 YQE_10385 T333350_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hmg20b
M02487_2.00
Mus musculus
NNATTATWHWN

NWDWATAATNN
PBM
Weirauch et al.(2014)
pTH8555
0.436 0.478
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENN72996 Sox 31 97

Links

Other Sox family TFs
Other Dendroctonus ponderosae TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g00776 Acanthocheilonema viteae nAv.1.0.1.g00776 I 0.000
ACYPI48827 Acyrthosiphon pisum ACYPI48827 I 0.000
ACYPI008647 Acyrthosiphon pisum ACYPI008647 I 0.000
ENSAMEG00000004435 Ailuropoda melanoleuca ENSAMEG00000004435 I 0.000
Alligator_sinensis_CCG020430.1 Alligator sinensis Alligator_sinensis_CCG020430.1 I 0.000
Aqu1.224085 Amphimedon queenslandica Aqu1.224085 I 0.000
ENSAPLG00000002694 Anas platyrhynchos ENSAPLG00000002694 I 0.000
ANCCAN_07957 Ancylostoma caninum ANCCAN_07957 I 0.000
ANCCEY_15520 Ancylostoma ceylanicum ANCCEY_15520 I 0.000
ANCDUO_00071 Ancylostoma duodenale ANCDUO_00071 I 0.000
ACOC_0000844001 Angiostrongylus costaricensis ACOC_0000844001 I 0.000
ASIM_0001003201 Anisakis simplex ASIM_0001003201 I 0.000
NFYA Anolis carolinensis ENSACAG00000016527 I 0.000
AALB004535 Anopheles albimanus AALB004535 I 0.000
AARA007990 Anopheles arabiensis AARA007990 I 0.000
AATE016159 Anopheles atroparvus AATE016159 I 0.000
ACHR000726 Anopheles christyi ACHR000726 I 0.000
ACOM025626 Anopheles coluzzii ACOM025626 I 0.000
ACUA028400 Anopheles culicifacies ACUA028400 I 0.000
ADAC005077 Anopheles darlingi ADAC005077 I 0.000
AFAF018449 Anopheles farauti AFAF018449 I 0.000
AFUN002061 Anopheles funestus AFUN002061 I 0.000
AGAP007376 Anopheles gambiae AGAP007376 I 0.000
AMAM001825 Anopheles maculatus AMAM001825 I 0.000
AMEC004928 Anopheles melas AMEC004928 I 0.000
AMEM003440 Anopheles merus AMEM003440 I 0.000
AQUA004503 Anopheles quadriannulatus AQUA004503 I 0.000
ASTEI01331 Anopheles stephensi ASTEI01331 I 0.000
GB50732 Apis mellifera GB50732 I 0.000
Afo_R002068 Aptenodytes forsteri Afo_R002068 I 0.000
ASU_03710 Ascaris suum ASU_03710 I 0.000
ENSAMXG00000002532 Astyanax mexicanus ENSAMXG00000002532 I 0.000
ACEP21720 Atta cephalotes ACEP21720 I 0.000
ENSP00000345702-D2 Bos grunniens ENSP00000345702-D2 I 0.000
NFYA Bos taurus ENSBTAG00000009905 I 0.000
BOTBODRAFT_182611 Botryobasidium botryosum BOTBODRAFT_182611 I 0.000
fgenesh2_pg.scaffold_208000070 Branchiostoma floridae fgenesh2_pg.scaffold_208000070 I 0.000
estExt_fgenesh2_pg.C_2670023 Branchiostoma floridae estExt_fgenesh2_pg.C_2670023 I 0.000
Bm6776 Brugia malayi Bm6776 I 0.000
Brh_R001483 Buceros rhinoceros Brh_R001483 I 0.000
NFYA Callithrix jacchus ENSCJAG00000004074 I 0.000
Aan_R003793 Calypte anna Aan_R003793 I 0.000
Cflo_01621--XP_001121566.1_APIME Camponotus floridanus Cflo_01621--XP_001121566.1_APIME I 0.000
CAGL0H07843g Candida glabrata CAGL0H07843g I 0.000
NFYA Canis familiaris ENSCAFG00000001580 I 0.000
CapteG223273 Capitella teleta CapteG223273 I 0.000
CAOG_07995 Capsaspora owczarzaki CAOG_07995 I 0.000
NFYA Cavia porcellus ENSCPOG00000011146 I 0.000
Cmyd_10011198 Chelonia mydas Cmyd_10011198 I 0.000
ENSCSAG00000011196 Chlorocebus sabaeus ENSCSAG00000011196 I 0.000
CLEC007231 Cimex lectularius CLEC007231 I 0.000
ENSCING00000013482 Ciona intestinalis ENSCING00000013482 I 0.000
ENSCSAVG00000007408 Ciona savignyi ENSCSAVG00000007408 I 0.000
csin107256 Clonorchis sinensis csin107256 I 0.000
CGI_10012001 Crassostrea gigas CGI_10012001 I 0.000
CGI_10002627 Crassostrea gigas CGI_10002627 I 0.000
CpipJ_CPIJ010764 Culex pipiens CpipJ_CPIJ010764 I 0.000
CpipJ_CPIJ017497 Culex pipiens CpipJ_CPIJ017497 I 0.000
CPIJ017497 Culex quinquefasciatus CPIJ017497 I 0.000
CPIJ010764 Culex quinquefasciatus CPIJ010764 I 0.000
KGM_14733 Danaus plexippus KGM_14733 I 0.000
nfya Danio rerio ENSDARG00000042004 I 0.000
nfyal Danio rerio ENSDARG00000001621 I 0.000
DAPPUDRAFT_300656 Daphnia pulex DAPPUDRAFT_300656 I 0.000
NFYA Dasypus novemcinctus ENSDNOG00000039692 I 0.000
YQE_10237 Dendroctonus ponderosae YQE_10237 I 0.000
DICVIV_12815 Dictyocaulus viviparus DICVIV_12815 I 0.000
nfyA Dictyostelium discoideum DDB_G0282697 I 0.000
Nfya Dipodomys ordii ENSDORG00000006450 I 0.000
nDi.2.2.2.g05199 Dirofilaria immitis nDi.2.2.2.g05199 I 0.000
DME_0000143101 Dracunculus medinensis DME_0000143101 I 0.000
GF24667 Drosophila ananassae FBgn0101660 I 0.000
GG14038 Drosophila erecta FBgn0106300 I 0.000
GH15528 Drosophila grimshawi FBgn0123000 I 0.000
Nf-YA Drosophila melanogaster FBgn0035993 I 0.000
GI16805 Drosophila mojavensis FBgn0139552 I 0.000
GA17755 Drosophila pseudoobscura FBgn0077764 I 0.000
GJ12551 Drosophila virilis FBgn0199791 I 0.000
GE21241 Drosophila yakuba FBgn0238513 I 0.000
ECANG7_02027 Echinococcus canadensis ECANG7_02027 I 0.000
EmuJ_001061700 Echinococcus multilocularis EmuJ_001061700 I 0.000
ENSETEG00000000629 Echinops telfairi ENSETEG00000000629 I 0.000
ECPE_0000487901 Echinostoma caproni ECPE_0000487901 I 0.000
EVEC_0000960901 Enterobius vermicularis EVEC_0000960901 N 0.000
NFYA Equus caballus ENSECAG00000007952 I 0.000
ENSEEUG00000006487 Erinaceus europaeus ENSEEUG00000006487 I 0.000
D915_02266 Fasciola hepatica D915_02266 I 0.000
NFYA Felis catus ENSFCAG00000027813 I 0.000
ENSFALG00000002949 Ficedula albicollis ENSFALG00000002949 I 0.000
ENSGMOG00000001226 Gadus morhua ENSGMOG00000001226 I 0.000
NFYA Gallus gallus ENSGALG00000003247 I 0.000
nfyal Gasterosteus aculeatus ENSGACG00000007867 I 0.000
Gfo_R002980 Geospiza fortis Gfo_R002980 I 0.000
GPLIN_001226400 Globodera pallida GPLIN_001226400 I 0.000
GPUH_0002134401 Gongylonema pulchrum GPUH_0002134401 I 0.000
NFYA Gorilla gorilla ENSGGOG00000008485 I 0.000
HCOI00898900 Haemonchus contortus HCOI00898900 I 0.000
HPLM_0000552201 Haemonchus placei HPLM_0000552201 I 0.000
HHAL009455-PA Halyomorpha halys HHAL009455-PA I 0.000
Hsal_09569--XP_001121566.1_APIME Harpegnathos saltator Hsal_09569--XP_001121566.1_APIME I 0.000
HPBE_0000764601 Heligmosomoides bakeri HPBE_0000764601 I 0.000
HelroG146050 Helobdella robusta HelroG146050 I 0.000
Hba_19892 Heterorhabditis bacteriophora Hba_19892 I 0.000
NFYA Homo sapiens ENSG00000001167 D 0.000
TTAC_0000640001 Hydatigera taeniaeformis TTAC_0000640001 I 0.000
HDID_0001056801 Hymenolepis diminuta HDID_0001056801 I 0.000
HmN_000419600 Hymenolepis microstoma HmN_000419600 I 0.000
HNAJ_0000223001 Hymenolepis nana HNAJ_0000223001 I 0.000
ENSSTOG00000023405 Ictidomys tridecemlineatus ENSSTOG00000023405 I 0.000
ISCW017122 Ixodes scapularis ISCW017122 I 0.000
ENSLACG00000015334 Latimeria chalumnae ENSLACG00000015334 I 0.000
ENSLOCG00000012292 Lepisosteus oculatus ENSLOCG00000012292 I 0.000
LDEC000161 Leptinotarsa decemlineata LDEC000161 I 0.000
nLs.2.1.2.g05605 Litomosoides sigmodontis nLs.2.1.2.g05605 I 0.000
LOAG_02863 Loa loa LOAG_02863 I 0.000
LotgiG96004 Lottia gigantea LotgiG96004 I 0.000
LotgiG159581 Lottia gigantea LotgiG159581 I 0.000
NFYA Loxodonta africana ENSLAFG00000016570 I 0.000
ENSP00000345702 Macaca fascicularis ENSP00000345702 I 0.000
NFYA Macaca mulatta ENSMMUG00000021173 I 0.000
ENSMEUG00000005917 Macropus eugenii ENSMEUG00000005917 I 0.000
MDP0000183865 Malus domestica MDP0000183865 I 0.000
MESCA012339 Megaselia scalaris MESCA012339 I 0.000
NFYA Meleagris gallopavo ENSMGAG00000010140 I 0.000
maker-nMf.1.1.scaf00089-snap-gene-0.29 Meloidogyne floridensis maker-nMf.1.1.scaf00089-snap-gene-0.29 I 0.000
MhA1_Contig2248.frz3.gene3 Meloidogyne hapla MhA1_Contig2248.frz3.gene3 I 0.000
MCOS_0000435001 Mesocestoides corti MCOS_0000435001 I 0.000
NFYA Microcebus murinus ENSMICG00000009686 I 0.000
estExt_fgenesh2_pg.C_Chr_130205 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_130205 N 0.000
ML45131a Mnemiopsis leidyi ML45131a I 0.000
ML027313a Mnemiopsis leidyi ML027313a I 0.000
NFYA Monodelphis domestica ENSMODG00000013084 I 0.000
fgeneshMC_pg.10_#_374 Mucor circinelloides fgeneshMC_pg.10_#_374 I 0.000
MDOA015095 Musca domestica MDOA015095 I 0.000
ENSMPUG00000013686 Mustela putorius furo ENSMPUG00000013686 I 0.000
Nfya Mus musculus ENSMUSG00000023994 D 0.000
Myotis_brandtii_NFYA_10015424 Myotis brandtii Myotis_brandtii_NFYA_10015424 I 0.000
NFYA Myotis lucifugus ENSMLUG00000008253 I 0.000
NV16776 Nasonia vitripennis NV16776 I 0.000
NECAME_09605 Necator americanus NECAME_09605 I 0.000
NEMVEDRAFT_v1g248844 Nematostella vectensis NEMVEDRAFT_v1g248844 I 0.000
NEMVEDRAFT_v1g82757 Nematostella vectensis NEMVEDRAFT_v1g82757 I 0.000
NBR_0000887901 Nippostrongylus brasiliensis NBR_0000887901 I 0.000
ENSNLEG00000005028 Nomascus leucogenys ENSNLEG00000005028 I 0.000
Ocbimv22031841m.g Octopus bimaculoides Ocbimv22031841m.g I 0.000
Ocbimv22027261m.g Octopus bimaculoides Ocbimv22027261m.g I 0.000
OESDEN_02547 Oesophagostomum dentatum OESDEN_02547 I 0.000
OESDEN_11135 Oesophagostomum dentatum OESDEN_11135 I 0.000
SNAPOd2T00008768001 Oikopleura dioica SNAPOd2T00008768001 I 0.000
nOo.2.0.1.g03339 Onchocerca ochengi nOo.2.0.1.g03339 I 0.000
WBGene00242147 Onchocerca volvulus WBGene00242147 I 0.000
T265_04195 Opisthorchis viverrini T265_04195 I 0.000
NFYA Ornithorhynchus anatinus ENSOANG00000011990 I 0.000
NFYA Oryctolagus cuniculus ENSOCUG00000016869 I 0.000
nfyal Oryzias latipes ENSORLG00000006088 I 0.000
NFYA Otolemur garnettii ENSOGAG00000002636 I 0.000
ENSOARG00000000894 Ovis aries ENSOARG00000000894 I 0.000
NFYA Pan troglodytes ENSPTRG00000018146 I 0.000
ENSPANG00000009714 Papio anubis ENSPANG00000009714 I 0.000
PTRK_0000025200 Parastrongyloides trichosuri PTRK_0000025200 N 0.000
PHUM011400 Pediculus humanus PHUM011400 I 0.000
ENSPSIG00000013239 Pelodiscus sinensis ENSPSIG00000013239 I 0.000
ENSPMAG00000000964 Petromyzon marinus ENSPMAG00000000964 I 0.000
PPAI000251 Phlebotomus papatasi PPAI000251 I 0.000
ENSPFOG00000012890 Poecilia formosa ENSPFOG00000012890 I 0.000
Pvit_06013 Pogona vitticeps Pvit_06013 I 0.000
ENSPPYG00000016588 Pongo abelii ENSPPYG00000016588 I 0.000
scaffold5-EXSNAP2012.16 Pristionchus exspectatus scaffold5-EXSNAP2012.16 I 0.000
NFYA Procavia capensis ENSPCAG00000011508 I 0.000
PXEA_0001432401 Protopolystoma xenopodis PXEA_0001432401 I 0.000
NFYA Pteropus vampyrus ENSPVAG00000008318 I 0.000
Nfya Rattus norvegicus ENSRNOG00000012702 I 0.000
V565_064680 Rhizoctonia solani V565_064680 I 0.000
GLOINDRAFT_349601 Rhizophagus irregularis GLOINDRAFT_349601 I 0.000
RPRC000951 Rhodnius prolixus RPRC000951 I 0.000
RHTO_00634 Rhodosporidium toruloides RHTO_00634 I 0.000
RTG_01693 Rhodotorula glutinis RTG_01693 I 0.000
nRc.2.0.1.g32781 Romanomermis culicivorax nRc.2.0.1.g32781 I 0.000
Sakowv30044373m.g Saccoglossus kowalevskii Sakowv30044373m.g I 0.000
Sakowv30001860m.g Saccoglossus kowalevskii Sakowv30001860m.g I 0.000
ENSSHAG00000017808 Sarcophilus harrisii ENSSHAG00000017808 I 0.000
SSLN_0000312901 Schistocephalus solidus SSLN_0000312901 I 0.000
SCUD_0001212601 Schistosoma curassoni SCUD_0001212601 I 0.000
A_04341 Schistosoma haematobium A_04341 I 0.000
Sjc_0096630 Schistosoma japonicum Sjc_0096630 I 0.000
Smp_030250 Schistosoma mansoni Smp_030250 I 0.000
SMRZ_0000504601 Schistosoma margrebowiei SMRZ_0000504601 I 0.000
SMTD_0000774701 Schistosoma mattheei SMTD_0000774701 I 0.000
SROB_0000925201 Schistosoma rodhaini SROB_0000925201 I 0.000
SMU15029949 Schmidtea mediterranea SMU15029949 I 0.000
SMU15024997 Schmidtea mediterranea SMU15024997 I 0.000
SBAD_0000676601 Soboliphyme baturini SBAD_0000676601 I 0.000
SINV17788 Solenopsis invicta SINV17788 I 0.000
NFYA Sorex araneus ENSSARG00000009765 I 0.000
estExt_fgenesh1_pg.C_120063 Sporobolomyces roseus estExt_fgenesh1_pg.C_120063 I 0.000
L596_g5816 Steinernema carpocapsae L596_g5816 I 0.000
L889_g30157 Steinernema feltiae L889_g30157 I 0.000
L893_g18096 Steinernema glaseri L893_g18096 I 0.000
L898_g620 Steinernema monticolum L898_g620 I 0.000
L892_g3951 Steinernema scapterisci L892_g3951 I 0.000
SPU_025589 Strongylocentrotus purpuratus SPU_025589 I 0.000
SPU_025737 Strongylocentrotus purpuratus SPU_025737 I 0.000
SPAL_0000205900 Strongyloides papillosus SPAL_0000205900 N 0.000
SSTP_0000922000 Strongyloides stercoralis SSTP_0000922000 N 0.000
SVE_0978200 Strongyloides venezuelensis SVE_0978200 N 0.000
SVUK_0001685001 Strongylus vulgaris SVUK_0001685001 N 0.000
ENSSSCG00000001600 Sus scrofa ENSSSCG00000001600 I 0.000
NFYA Sus scrofa ENSSSCG00000001611 I 0.000
ENSSSCG00000022941 Sus scrofa ENSSSCG00000022941 I 0.000
SMUV_0000428301 Syphacia muris SMUV_0000428301 I 0.000
TsM_000826500 Taenia solium TsM_000826500 I 0.000
NFYA Taeniopygia guttata ENSTGUG00000001832 I 0.000
nfyal Takifugu rubripes ENSTRUG00000003925 I 0.000
ENSTSYG00000007176 Tarsius syrichta ENSTSYG00000007176 I 0.000
TELCIR_00805 Teladorsagia circumcincta TELCIR_00805 I 0.000
tetur23g00370 Tetranychus urticae tetur23g00370 I 0.000
nfyal Tetraodon nigroviridis ENSTNIG00000015135 I 0.000
TCLT_0000871701 Thelazia callipaeda TCLT_0000871701 I 0.000
TCNE_0001890401 Toxocara canis TCNE_0001890401 I 0.000
TC007453 Tribolium castaneum TC007453 I 0.000
TRE_0001025401 Trichobilharzia regenti TRE_0001025401 I 0.000
TriadG58635 Trichoplax adhaerens TriadG58635 I 0.000
TMUE_s0062005000 Trichuris muris TMUE_s0062005000 I 0.000
D918_06860 Trichuris suis D918_06860 I 0.000
TTRE_0000464501 Trichuris trichiura TTRE_0000464501 I 0.000
NFYA Tursiops truncatus ENSTTRG00000013394 I 0.000
Tal_R012767 Tyto alba Tal_R012767 I 0.000
NFYA Vicugna pacos ENSVPAG00000008028 I 0.000
WUBG_05875 Wuchereria bancrofti WUBG_05875 I 0.000
AAI00179 Xenopus laevis AAI00179 I 0.000
nfya.S Xenopus laevis XB-GENE-942013 I 0.000
nfya Xenopus tropicalis XB-GENE-942007 I 0.000
ENSXMAG00000010069 Xiphophorus maculatus ENSXMAG00000010069 I 0.000