gw1.22.254.1 (Fragilariopsis cylindrus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 gw1.22.254.1 T334245_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.22.254.1 Sox 11 85

Links

Other Sox family TFs
Other Fragilariopsis cylindrus TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-piw_contig_790-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_790-fgenesh-gene-0.2 N 0.473
PK08788.1 Cannabis sativa PK08788.1 N 0.469
POPTR_0017s11460 Populus trichocarpa POPTR_0017s11460 I 0.443
SapurV1A.0447s0140 Salix purpurea SapurV1A.0447s0140 I 0.443
OIDMADRAFT_143526 Oidiodendron maius OIDMADRAFT_143526 I 0.442
G647_10093 Cladophialophora carrionii G647_10093 I 0.440
PV05_09944 Exophiala xenobiotica PV05_09944 I 0.440
A1O1_01197 Capronia coronata A1O1_01197 I 0.440
PV08_04655 Exophiala spinifera PV08_04655 I 0.440
HMPREF1120_00213 Exophiala dermatitidis HMPREF1120_00213 I 0.440
Z518_04911 Rhinocladiella mackenziei Z518_04911 I 0.440
PV11_09703 Exophiala sideris PV11_09703 I 0.440
A1O3_08778 Capronia epimyces A1O3_08778 I 0.440
PV06_04154 Exophiala oligosperma PV06_04154 I 0.440
A1O7_01726 Cladophialophora yegresii A1O7_01726 I 0.440
TRIVIDRAFT_228694 Trichoderma virens TRIVIDRAFT_228694 I 0.434
F503_04824 Ophiostoma piceae uamh F503_04824 I 0.429
EPUS_00081 Endocarpon pusillum EPUS_00081 I 0.428
COCCADRAFT_24603 Bipolaris zeicola COCCADRAFT_24603 I 0.425
SPBR_04745 Sporothrix brasiliensis SPBR_04745 I 0.423
CMQ_8074 Grosmannia clavigera CMQ_8074 I 0.423
CCM_01555 Cordyceps militaris CCM_01555 I 0.423
1400010135 Ostreococcus tauri 1400010135 I 0.423
BBA_01214 Beauveria bassiana BBA_01214 I 0.423
PV11_07328 Exophiala sideris PV11_07328 I 0.420
PFICI_00741 Pestalotiopsis fici PFICI_00741 I 0.420
PEX1_089460 Penicillium expansum PEX1_089460 I 0.420
S40285_00704 Stachybotrys chlorohalonata S40285_00704 I 0.420
PITC_061650 Penicillium italicum PITC_061650 I 0.420
PV10_02644 Exophiala mesophila PV10_02644 I 0.420
S40288_08316 Stachybotrys chartarum S40288_08316 I 0.420
PV07_11822 Cladophialophora immunda PV07_11822 I 0.420
PV05_08806 Exophiala xenobiotica PV05_08806 I 0.420
PV08_09792 Exophiala spinifera PV08_09792 I 0.420
PODANS_1_14230 Podospora anserina PODANS_1_14230 I 0.420
PV04_08099 Capronia semiimmersa PV04_08099 I 0.420
PV06_10198 Exophiala oligosperma PV06_10198 I 0.420
TRIVIDRAFT_217092 Trichoderma virens TRIVIDRAFT_217092 I 0.420
Z519_01307 Cladophialophora bantiana Z519_01307 I 0.420
Z518_06904 Rhinocladiella mackenziei Z518_06904 I 0.420
Z517_03232 Fonsecaea pedrosoi Z517_03232 I 0.420
VHEMI02691 Torrubiella hemipterigena VHEMI02691 I 0.420
fgenesh1_kg.sca_1_chr1_3_0000051 Nectria haematococca fgenesh1_kg.sca_1_chr1_3_0000051 I 0.420
fgenesh3_kg.24__2__378_3_CCSY Neurospora discreta fgenesh3_kg.24__2__378_3_CCSY I 0.420
Pc13g09020 Penicillium chrysogenum Pc13g09020 I 0.420
fgenesh1_pg.00866_#_414 Aspergillus carbonarius fgenesh1_pg.00866_#_414 I 0.420
NCU09995 Neurospora crassa NCU09995 I 0.420
VDBG_06173 Verticillium alfalfae VDBG_06173 I 0.420
VDAG_03330 Verticillium dahliae VDAG_03330 I 0.420
PDIP_30290 Penicillium digitatum PDIP_30290 I 0.420
TRIREDRAFT_3007 Trichoderma reesei TRIREDRAFT_3007 I 0.420
TRIATDRAFT_259074 Trichoderma atroviride TRIATDRAFT_259074 I 0.420
THITE_126111 Thielavia terrestris THITE_126111 I 0.420
U727_00431321111 Penicillium solitum U727_00431321111 I 0.420
UCREL1_7266 Eutypa lata UCREL1_7266 I 0.420
V499_06692 Pseudogymnoascus pannorum V499_06692 I 0.420
UREG_07427 Uncinocarpus reesii UREG_07427 I 0.420
UCRPA7_2040 Togninia minima UCRPA7_2040 I 0.420
SPBR_08754 Sporothrix brasiliensis SPBR_08754 I 0.420
NEUTE1DRAFT_118965 Neurospora tetrasperma NEUTE1DRAFT_118965 I 0.420
CGGC5_4927 Colletotrichum gloeosporioides CGGC5_4927 I 0.420
CFIO01_02023 Colletotrichum fioriniae CFIO01_02023 I 0.420
CCM_02275 Cordyceps militaris CCM_02275 I 0.420
NFIA_065700 Neosartorya fischeri CADNFIAG00006255 I 0.420
CH063_13936 Colletotrichum higginsianum CH063_13936 I 0.420
CHGG_02718 Chaetomium globosum CHGG_02718 I 0.420
PCH_Pc13g09020 Penicillium rubens PCH_Pc13g09020 I 0.420
CSUB01_03820 Colletotrichum sublineola CSUB01_03820 I 0.420
CPC735_006120 Coccidioides posadasii CPC735_006120 I 0.420
Cob_05549 Colletotrichum orbiculare Cob_05549 I 0.420
ANIA_02885 Aspergillus nidulans CADANIAG00010204 I 0.420
CADANGAG00002256 Aspergillus niger CADANGAG00002256 I 0.420
ACRE_009770 Acremonium chrysogenum ACRE_009770 I 0.420
A1O7_07623 Cladophialophora yegresii A1O7_07623 I 0.420
A1O5_02172 Cladophialophora psammophila A1O5_02172 I 0.420
VDBG_06173 Verticillium albo atrum VDBG_06173 I 0.420
BBA_04234 Beauveria bassiana BBA_04234 I 0.420
Bcin11g05240 Botrytis cinerea Bcin11g05240 I 0.420
AFUA_3G11610 Aspergillus fumigatus CADAFUAG00005351 I 0.420
CADAFLAG00002475 Aspergillus flavus CADAFLAG00002475 I 0.420
ACLA_039500 Aspergillus clavatus CADACLAG00003509 I 0.420
BDDG_06343 Blastomyces dermatitidis BDDG_06343 I 0.420
EURHEDRAFT_457143 Aspergillus ruber EURHEDRAFT_457143 I 0.420
CTHT_0010300 Chaetomium thermophilum CTHT_0010300 I 0.420
MAPG_02686 Magnaporthe poae MAPG_02686 I 0.420
M7I_4892 Glarea lozoyensis M7I_4892 I 0.420
HMPREF1624_01793 Sporothrix schenckii HMPREF1624_01793 I 0.420
HMPREF1120_01828 Exophiala dermatitidis HMPREF1120_01828 I 0.420
MYCTH_2296547 Myceliophthora thermophila MYCTH_2296547 I 0.420
NechaG73395 Fusarium solani NechaG73395 I 0.420
PABG_02251 Paracoccidioides brasiliensis PABG_02251 I 0.420
PAAG_01986 Paracoccidioides sp lutzii PAAG_01986 I 0.420
OCS_02580 Ophiocordyceps sinensis OCS_02580 I 0.420
CIMG_03667 Coccidioides immitis CIMG_03667 I 0.420
FFUJ_00897 Fusarium fujikuroi FFUJ_00897 I 0.420
HCBG_06756 Histoplasma capsulatum HCBG_06756 I 0.420
GMDG_00086 Pseudogymnoascus destructans GMDG_00086 I 0.420
FPSE_00047 Fusarium pseudograminearum FPSE_00047 I 0.420
FOXG_00672 Fusarium oxysporum FOXG_00672 I 0.420
FGRRES_00385 Fusarium graminearum FGRRES_00385 I 0.420
FVEG_00840 Fusarium verticillioides FVEG_00840 I 0.420
GGTG_09659 Gaeumannomyces graminis GGTG_09659 I 0.420
G647_02460 Cladophialophora carrionii G647_02460 I 0.420
GLRG_04072 Colletotrichum graminicola GLRG_04072 I 0.420
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.419
CMQ_4428 Grosmannia clavigera CMQ_4428 I 0.418
gww1.1.1.1342.1 Pichia stipitis gww1.1.1.1342.1 I 0.416
PICST_23779 Scheffersomyces stipitis PICST_23779 I 0.416
PVAR5_3907 Byssochlamys spectabilis PVAR5_3907 I 0.415