CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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1400010135
(
Ostreococcus tauri
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
1400010135
T335136_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02819
M02490_2.00
Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN
PBM
Weirauch et al.(2014)
pTH9672
0.431
0.368
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
1400010135
Sox
479
546
RQRGLSAYMFFSAAKRAEIAEANPEFGITDIAKALGERWKTVSDEKSVYQQQAEEDKARYEREMAEYN
Links
Other
Sox
family TFs
Other
Ostreococcus tauri
TFs
94 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gw1.20.66.1
Ostreococcus RCC809
gw1.20.66.1
N
0.631
OSTLU_18991
Ostreococcus lucimarinus
OSTLU_18991
N
0.571
OSTLU_31946
Ostreococcus lucimarinus
OSTLU_31946
I
0.534
maker-piw_contig_790-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_790-fgenesh-gene-0.2
N
0.487
CPUR_04901
Claviceps purpurea
CPUR_04901
I
0.482
ETH_00027140
Eimeria tenella
ETH_00027140
I
0.474
M7I_1578
Glarea lozoyensis
M7I_1578
I
0.470
MBM_02410
Marssonina brunnea
MBM_02410
I
0.470
SS1G_04584
Sclerotinia sclerotiorum
SS1G_04584
I
0.458
SBOR_0403
Sclerotinia borealis
SBOR_0403
I
0.458
SSTP_0000585600
Strongyloides stercoralis
SSTP_0000585600
N
0.453
SVE_0954900
Strongyloides venezuelensis
SVE_0954900
N
0.453
SPAL_0001085700
Strongyloides papillosus
SPAL_0001085700
N
0.453
PTRK_0001161700
Parastrongyloides trichosuri
PTRK_0001161700
N
0.453
BRADI2G33580
Brachypodium distachyon
BRADI2G33580
N
0.448
MTR_5g082570
Medicago truncatula
MTR_5g082570
I
0.448
RSKR_0000269500
Rhabditophanes kr3021
RSKR_0000269500
N
0.446
gw1.6.1665.1
Ostreococcus RCC809
gw1.6.1665.1
I
0.444
OIDMADRAFT_143526
Oidiodendron maius
OIDMADRAFT_143526
I
0.443
POPTR_0017s11460
Populus trichocarpa
POPTR_0017s11460
I
0.441
PODANS_1_7390
Podospora anserina
PODANS_1_7390
I
0.441
VDBG_04589
Verticillium albo atrum
VDBG_04589
I
0.441
VDAG_09161
Verticillium dahliae
VDAG_09161
I
0.441
Z518_04911
Rhinocladiella mackenziei
Z518_04911
I
0.441
SapurV1A.0447s0140
Salix purpurea
SapurV1A.0447s0140
I
0.441
PK08788.1
Cannabis sativa
PK08788.1
N
0.441
VDBG_04589
Verticillium alfalfae
VDBG_04589
I
0.441
VDAG_04140
Verticillium dahliae
VDAG_04140
I
0.441
PV08_04655
Exophiala spinifera
PV08_04655
I
0.441
PV11_09703
Exophiala sideris
PV11_09703
I
0.441
PV06_04154
Exophiala oligosperma
PV06_04154
I
0.441
PV05_09944
Exophiala xenobiotica
PV05_09944
I
0.441
G647_10093
Cladophialophora carrionii
G647_10093
I
0.441
HMPREF1120_00213
Exophiala dermatitidis
HMPREF1120_00213
I
0.441
A1O3_08778
Capronia epimyces
A1O3_08778
I
0.441
A1O1_01197
Capronia coronata
A1O1_01197
I
0.441
MGG_01641
Magnaporthe oryzae
MGG_01641
I
0.441
A1O7_01726
Cladophialophora yegresii
A1O7_01726
I
0.441
PHSY_006278
Pseudozyma hubeiensis
PHSY_006278
I
0.439
Bcin01g08840
Botrytis cinerea
Bcin01g08840
I
0.438
BGHDH14_bgh04339
Blumeria graminis
BGHDH14_bgh04339
I
0.433
THITE_2121767
Thielavia terrestris
THITE_2121767
I
0.431
NEUTE1DRAFT_106544
Neurospora tetrasperma
NEUTE1DRAFT_106544
I
0.431
estExt_fgenesh3_kg.C_40082
Neurospora discreta
estExt_fgenesh3_kg.C_40082
I
0.431
NCU02819
Neurospora crassa
NCU02819
D
0.431
SMAC_00615
Sordaria macrospora
SMAC_00615
I
0.431
MANI_030028
Metarhizium anisopliae
MANI_030028
I
0.430
X797_001988
Metarhizium robertsii
X797_001988
I
0.430
MBR_01483
Metarhizium brunneum
MBR_01483
I
0.430
MGU_02157
Metarhizium guizhouense
MGU_02157
I
0.430
MAJ_04030
Metarhizium majus
MAJ_04030
I
0.430
CH063_04081
Colletotrichum higginsianum
CH063_04081
I
0.428
CSUB01_00364
Colletotrichum sublineola
CSUB01_00364
I
0.428
GLRG_01394
Colletotrichum graminicola
GLRG_01394
I
0.428
CFIO01_13531
Colletotrichum fioriniae
CFIO01_13531
I
0.428
CGGC5_9539
Colletotrichum gloeosporioides
CGGC5_9539
I
0.428
GB47837
Apis mellifera
GB47837
N
0.426
Cflo_05893--XP_624266.1_APIME
Camponotus floridanus
Cflo_05893--XP_624266.1_APIME
N
0.426
TPHA_0A03740
Tetrapisispora phaffii
TPHA_0A03740
I
0.426
Hsal_13112--XP_624266.1_APIME
Harpegnathos saltator
Hsal_13112--XP_624266.1_APIME
N
0.426
SINV22588
Solenopsis invicta
SINV22588
N
0.426
CTHT_0053790
Chaetomium thermophilum
CTHT_0053790
I
0.424
TRIATDRAFT_321166
Trichoderma atroviride
TRIATDRAFT_321166
I
0.424
gw1.22.254.1
Fragilariopsis cylindrus
gw1.22.254.1
N
0.423
TA04735
Theileria annulata
TA04735
I
0.423
TP03_0469
Theileria parva
TP03_0469
I
0.423
FPSE_02664
Fusarium pseudograminearum
FPSE_02664
I
0.422
S40288_09735
Stachybotrys chartarum
S40288_09735
I
0.422
FFUJ_02729
Fusarium fujikuroi
FFUJ_02729
I
0.422
ACRE_011600
Acremonium chrysogenum
ACRE_011600
I
0.422
UM02364
Ustilago maydis
UM02364
I
0.420
PSEUBRA_SCAF4g05002
Pseudozyma brasiliensis
PSEUBRA_SCAF4g05002
I
0.420
CapteG172235
Capitella teleta
CapteG172235
I
0.419
Phatr3_J39880
Phaeodactylum tricornutum
Phatr3_J39880
N
0.418
Hba_18326
Heterorhabditis bacteriophora
Hba_18326
I
0.418
MYCTH_2294934
Myceliophthora thermophila
MYCTH_2294934
I
0.418
sr13567
Sporisorium reilianum
sr13567
I
0.418
Phatr3_J34626
Phaeodactylum tricornutum
Phatr3_J34626
N
0.418
ENSMMUG00000002541
Macaca mulatta
ENSMMUG00000002541
I
0.418
ISCW020032
Ixodes scapularis
ISCW020032
N
0.417
NDAI_0A05290
Naumovozyma dairenensis
NDAI_0A05290
I
0.417
CAGL0H08541g
Candida glabrata
CAGL0H08541g
I
0.417
EV44_g2383
Erysiphe necator
EV44_g2383
I
0.416
EDO05788.1
Babesia bovis
EDO05788.1
I
0.415
CBF60306.1
Babesia bovis
CBF60306.1
I
0.415
CBF61316.1
Babesia bovis
CBF61316.1
I
0.415
AAA27799.1
Babesia bovis
AAA27799.1
I
0.415
tetur02g08250
Tetranychus urticae
tetur02g08250
N
0.415
CBF61859.1
Babesia bovis
CBF61859.1
I
0.415
CBF82108.1
Babesia bovis
CBF82108.1
I
0.415
CBU86735.1
Babesia bovis
CBU86735.1
I
0.415
CBU86344.1
Babesia bovis
CBU86344.1
I
0.415
CBU85550.1
Babesia bovis
CBU85550.1
I
0.415
CBV00234.1
Babesia bovis
CBV00234.1
I
0.415