VDBG_04589 (Verticillium alfalfae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 VDBG_04589 T333210_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.664 0.791
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEY18480 Sox 116 182

Links

Other Sox family TFs
Other Verticillium alfalfae TFs

181 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VDBG_04589 Verticillium albo atrum VDBG_04589 I 0.741
VDAG_09161 Verticillium dahliae VDAG_09161 I 0.741
VDAG_04140 Verticillium dahliae VDAG_04140 I 0.741
MGG_01641 Magnaporthe oryzae MGG_01641 I 0.719
CFIO01_13531 Colletotrichum fioriniae CFIO01_13531 I 0.714
GLRG_01394 Colletotrichum graminicola GLRG_01394 I 0.714
CGGC5_9539 Colletotrichum gloeosporioides CGGC5_9539 I 0.714
CH063_04081 Colletotrichum higginsianum CH063_04081 I 0.714
CSUB01_00364 Colletotrichum sublineola CSUB01_00364 I 0.714
GGTG_01518 Gaeumannomyces graminis GGTG_01518 I 0.682
MAPG_06737 Magnaporthe poae MAPG_06737 I 0.682
PODANS_1_7390 Podospora anserina PODANS_1_7390 I 0.679
FFUJ_02729 Fusarium fujikuroi FFUJ_02729 I 0.675
S40288_09735 Stachybotrys chartarum S40288_09735 I 0.675
OCS_01486 Ophiocordyceps sinensis OCS_01486 I 0.674
MANI_030028 Metarhizium anisopliae MANI_030028 I 0.673
X797_001988 Metarhizium robertsii X797_001988 I 0.673
THITE_2121767 Thielavia terrestris THITE_2121767 I 0.669
ACRE_011600 Acremonium chrysogenum ACRE_011600 I 0.669
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.664
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.664
NCU02819 Neurospora crassa NCU02819 D 0.664
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.664
MYCTH_2294934 Myceliophthora thermophila MYCTH_2294934 I 0.663
CTHT_0053790 Chaetomium thermophilum CTHT_0053790 I 0.658
VHEMI10573 Torrubiella hemipterigena VHEMI10573 I 0.655
FPSE_02664 Fusarium pseudograminearum FPSE_02664 I 0.650
SPBR_04745 Sporothrix brasiliensis SPBR_04745 I 0.645
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.645
MGU_02157 Metarhizium guizhouense MGU_02157 I 0.644
MBR_01483 Metarhizium brunneum MBR_01483 I 0.644
MAJ_04030 Metarhizium majus MAJ_04030 I 0.644
F503_04824 Ophiostoma piceae uamh F503_04824 I 0.637
BBA_01214 Beauveria bassiana BBA_01214 I 0.628
MBM_02410 Marssonina brunnea MBM_02410 I 0.627
EV44_g2383 Erysiphe necator EV44_g2383 I 0.620
M7I_1578 Glarea lozoyensis M7I_1578 I 0.620
SBOR_0403 Sclerotinia borealis SBOR_0403 I 0.614
SS1G_04584 Sclerotinia sclerotiorum SS1G_04584 I 0.614
CCM_01555 Cordyceps militaris CCM_01555 I 0.601
Bcin01g08840 Botrytis cinerea Bcin01g08840 I 0.594
CMQ_8074 Grosmannia clavigera CMQ_8074 I 0.585
V499_08602 Pseudogymnoascus pannorum V499_08602 I 0.581
BGHDH14_bgh04339 Blumeria graminis BGHDH14_bgh04339 I 0.578
GMDG_05273 Pseudogymnoascus destructans GMDG_05273 I 0.575
gw1.4.435.1 Cryphonectria parasitica gw1.4.435.1 I 0.574
PV10_01993 Exophiala mesophila PV10_01993 I 0.571
Z519_04692 Cladophialophora bantiana Z519_04692 I 0.571
Z517_02317 Fonsecaea pedrosoi Z517_02317 I 0.571
TRIATDRAFT_321166 Trichoderma atroviride TRIATDRAFT_321166 I 0.571
A1O5_06047 Cladophialophora psammophila A1O5_06047 I 0.571
PV07_09313 Cladophialophora immunda PV07_09313 I 0.571
OIDMADRAFT_143526 Oidiodendron maius OIDMADRAFT_143526 I 0.566
PV08_04655 Exophiala spinifera PV08_04655 I 0.550
M437DRAFT_15090 Aureobasidium melanogenum M437DRAFT_15090 I 0.547
HMPREF1541_06859 Cyphellophora europaea HMPREF1541_06859 I 0.544
PV06_04154 Exophiala oligosperma PV06_04154 I 0.544
MPH_08050 Macrophomina phaseolina MPH_08050 I 0.544
A1O3_08778 Capronia epimyces A1O3_08778 I 0.544
HMPREF1120_00213 Exophiala dermatitidis HMPREF1120_00213 I 0.544
PV11_09703 Exophiala sideris PV11_09703 I 0.544
W97_04202 Coniosporium apollinis W97_04202 I 0.544
Z518_04911 Rhinocladiella mackenziei Z518_04911 I 0.544
A1O1_01197 Capronia coronata A1O1_01197 I 0.544
SAPIO_CDS3355 Scedosporium apiospermum SAPIO_CDS3355 I 0.543
PV04_00198 Capronia semiimmersa PV04_00198 I 0.542
LEMA_P064360.1 Leptosphaeria maculans LEMA_P064360.1 I 0.537
SETTUDRAFT_157792 Setosphaeria turcica SETTUDRAFT_157792 I 0.537
COCVIDRAFT_17843 Bipolaris victoriae COCVIDRAFT_17843 I 0.537
COCMIDRAFT_97534 Bipolaris oryzae COCMIDRAFT_97534 I 0.537
COCSADRAFT_180514 Bipolaris sorokiniana COCSADRAFT_180514 I 0.537
PTRG_02818 Pyrenophora triticirepentis PTRG_02818 I 0.537
COCSADRAFT_226282 Bipolaris sorokiniana COCSADRAFT_226282 I 0.537
AB07914.1 Alternaria brassicicola AB07914.1 I 0.537
PTT_17082 Pyrenophora teres PTT_17082 I 0.537
TRIVIDRAFT_228694 Trichoderma virens TRIVIDRAFT_228694 I 0.532
EPUS_09213 Endocarpon pusillum EPUS_09213 I 0.528
PV09_06887 Verruconis gallopava PV09_06887 I 0.528
M438DRAFT_338286 Aureobasidium pullulans M438DRAFT_338286 I 0.522
AUEXF2481DRAFT_32739 Aureobasidium subglaciale AUEXF2481DRAFT_32739 I 0.520
G647_10093 Cladophialophora carrionii G647_10093 I 0.515
PV05_09944 Exophiala xenobiotica PV05_09944 I 0.515
A1O7_01726 Cladophialophora yegresii A1O7_01726 I 0.515
COCCADRAFT_24603 Bipolaris zeicola COCCADRAFT_24603 I 0.512
AOL_s00076g81 Arthrobotrys oligospora AOL_s00076g81 I 0.512
A1O9_00742 Exophiala aquamarina A1O9_00742 I 0.512
COCVIDRAFT_115390 Bipolaris victoriae COCVIDRAFT_115390 I 0.512
FGRRES_07116 Fusarium graminearum FGRRES_07116 I 0.511
FOXG_01686 Fusarium oxysporum FOXG_01686 I 0.511
fgenesh1_pm.C_scaffold_14000132 Cochliobolus heterostrophus C5 fgenesh1_pm.C_scaffold_14000132 I 0.510
COCC4DRAFT_135921 Bipolaris maydis COCC4DRAFT_135921 I 0.510
GSTUM_00011974001 Tuber melanosporum GSTUM_00011974001 I 0.509
CLEC003860 Cimex lectularius CLEC003860 I 0.503
SNOG_03674 Stagonospora nodorum SNOG_03674 I 0.501
SNOG_03674 Phaeosphaeria nodorum SNOG_03674 I 0.501
DRE_06603 Drechslerella stenobrocha DRE_06603 I 0.492
mgf024995m Mimulus guttatus mgf024995m I 0.483
POPTR_0017s11460 Populus trichocarpa POPTR_0017s11460 I 0.482
TriadG64155 Trichoplax adhaerens TriadG64155 I 0.481
XP_002159252.1 Hydra magnipapillata XP_002159252.1 I 0.480
ENSMMUG00000031258 Macaca mulatta ENSMMUG00000031258 I 0.480
SapurV1A.0447s0140 Salix purpurea SapurV1A.0447s0140 I 0.475
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.474
ETH_00031100 Eimeria tenella ETH_00031100 I 0.474
ENSCJAG00000005187 Callithrix jacchus ENSCJAG00000005187 I 0.473
estExt_fgenesh1_pg.C_2230007 Physcomitrella patens estExt_fgenesh1_pg.C_2230007 I 0.469
fgeneshMC_pg.1_#_1771 Mucor circinelloides fgeneshMC_pg.1_#_1771 I 0.467
Cob_06475 Colletotrichum orbiculare Cob_06475 N 0.462
RO3G_07543 Rhizopus oryzae RO3G_07543 I 0.456
M438DRAFT_395502 Aureobasidium pullulans M438DRAFT_395502 N 0.456
RPRC006380 Rhodnius prolixus RPRC006380 I 0.455
RO3G_16060 Rhizopus oryzae RO3G_16060 I 0.455
M437DRAFT_52225 Aureobasidium melanogenum M437DRAFT_52225 N 0.454
Cmyd_10015367 Chelonia mydas Cmyd_10015367 N 0.451
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I 0.450
tox4b Danio rerio ENSDARG00000100163 I 0.446
ENSGGOG00000025016 Gorilla gorilla ENSGGOG00000025016 I 0.446
tox4.S Xenopus laevis XB-GENE-993810 I 0.446
gw1.16.190.1 Phycomyces blakesleeanus gw1.16.190.1 N 0.445
ENSOGAG00000026034 Otolemur garnettii ENSOGAG00000026034 I 0.443
1400010135 Ostreococcus tauri 1400010135 I 0.441
NDAI_0A05290 Naumovozyma dairenensis NDAI_0A05290 I 0.439
ENSCING00000009516 Ciona intestinalis ENSCING00000009516 N 0.438
ENSCSAVG00000009270 Ciona savignyi ENSCSAVG00000009270 N 0.438
CNF04730 Cryptococcus neoformans CNF04730 I 0.437
L804_02852 Cryptococcus gattii L804_02852 I 0.437
e_gw1.30.104.1 Phycomyces blakesleeanus e_gw1.30.104.1 N 0.437
estExt_Genewise1Plus.C_11422 Mucor circinelloides estExt_Genewise1Plus.C_11422 I 0.436
MAC_01051 Metarhizium acridum MAC_01051 N 0.436
ETH_00027140 Eimeria tenella ETH_00027140 I 0.435
RO3G_09728 Rhizopus oryzae RO3G_09728 I 0.434
Phatr3_J11888 Phaeodactylum tricornutum Phatr3_J11888 I 0.434
POPTR_0004s12290 Populus trichocarpa POPTR_0004s12290 I 0.432
ENSMMUG00000002541 Macaca mulatta ENSMMUG00000002541 I 0.432
BGIBMGA005289 Bombyx mori BGIBMGA005289 I 0.429
MCINX001064 Melitaea cinxia MCINX001064 I 0.429
estExt_Genewise1.C_20300 Phycomyces blakesleeanus estExt_Genewise1.C_20300 I 0.429
gw1.9.300.1 Sporobolomyces roseus gw1.9.300.1 I 0.429
KGM_13852 Danaus plexippus KGM_13852 I 0.429
RHTO_03328 Rhodosporidium toruloides RHTO_03328 I 0.429
fgeneshMC_pg.3_#_1190 Mucor circinelloides fgeneshMC_pg.3_#_1190 I 0.428
KNAG_0H00800 Kazachstania naganishii KNAG_0H00800 I 0.427
AUEXF2481DRAFT_6224 Aureobasidium subglaciale AUEXF2481DRAFT_6224 N 0.427
HMGB2 Ochotona princeps ENSOPRG00000010124 I 0.427
ENSCJAG00000031139 Callithrix jacchus ENSCJAG00000031139 I 0.427
HelroG145107 Helobdella robusta HelroG145107 N 0.425
Phatr3_J45662 Phaeodactylum tricornutum Phatr3_J45662 I 0.423
G210_1137 Candida maltosa G210_1137 I 0.422
LELG_04337 Lodderomyces elongisporus LELG_04337 I 0.422
MTR_5g082570 Medicago truncatula MTR_5g082570 I 0.421
RO3G_07013 Rhizopus oryzae RO3G_07013 I 0.421
estExt_fgeneshMC_pg.C_20910 Mucor circinelloides estExt_fgeneshMC_pg.C_20910 I 0.421
RO3G_15755 Rhizopus oryzae RO3G_15755 I 0.421
YALI0_C11671g Yarrowia lipolytica YALI0_C11671g I 0.421
NCAS_0A11010 Naumovozyma castellii NCAS_0A11010 I 0.420
Scas_Contig667.17 Saccharomyces castellii Scas_Contig667.17 I 0.420
CC1G_11400 Coprinopsis cinerea CC1G_11400 N 0.419
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I 0.418
MDOA014797 Musca domestica MDOA014797 I 0.418
PTTG_03136 Puccinia triticina PTTG_03136 N 0.418
PGTG_13945 Puccinia graminis PGTG_13945 N 0.418
GI20867 Drosophila mojavensis FBgn0143601 I 0.417
GL17523 Drosophila persimilis FBgn0155126 I 0.417
HmgZ Drosophila yakuba FBgn0068145 I 0.417
GH20784 Drosophila grimshawi FBgn0128247 I 0.417
GG20749 Drosophila erecta FBgn0112936 I 0.417
GA14726 Drosophila pseudoobscura FBgn0074753 I 0.417
GF11622 Drosophila ananassae FBgn0088662 I 0.417
GM15692 Drosophila sechellia FBgn0170608 I 0.417
GD25171 Drosophila simulans FBgn0196483 I 0.417
HmgZ Drosophila melanogaster FBgn0010228 I 0.417
UV8b_5742 Ustilaginoidea virens UV8b_5742 N 0.417
PPAI002522 Phlebotomus papatasi PPAI002522 I 0.417
CapteG172235 Capitella teleta CapteG172235 I 0.417
GJ20604 Drosophila virilis FBgn0207743 I 0.417
GK15658 Drosophila willistoni FBgn0217663 I 0.417
HmN_000028000 Hymenolepis microstoma HmN_000028000 N 0.416
Scas_Contig718.17 Saccharomyces castellii Scas_Contig718.17 I 0.416
NCAS_0I01260 Naumovozyma castellii NCAS_0I01260 I 0.416
ENSCAFG00000016282 Canis familiaris ENSCAFG00000016282 I 0.415
estExt_fgeneshMC_pm.C_110016 Mucor circinelloides estExt_fgeneshMC_pm.C_110016 N 0.415