CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CC1G_11400
(
Coprinopsis cinerea
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CC1G_11400
T326945_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EAU80600
Sox
77
145
PKRPASSYILFQNEVRNELKRQNPNLTNPELLTLISEKWKNMTDEQKETYNQQMLKAKEEYSQAKNAYD
Links
Other
Sox
family TFs
Other
Coprinopsis cinerea
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_191645
Agaricus bisporus
AGABI2DRAFT_191645
N
0.610
M413DRAFT_292945
Hebeloma cylindrosporum
M413DRAFT_292945
N
0.600
PILCRDRAFT_819051
Piloderma croceum
PILCRDRAFT_819051
N
0.567
GALMADRAFT_227586
Galerina marginata
GALMADRAFT_227586
N
0.567
GLOTRDRAFT_119701
Gloeophyllum trabeum
GLOTRDRAFT_119701
N
0.560
M378DRAFT_22958
Amanita muscaria
M378DRAFT_22958
N
0.548
K443DRAFT_167654
Laccaria amethystina
K443DRAFT_167654
N
0.528
PHLGIDRAFT_91671
Phlebiopsis gigantea
PHLGIDRAFT_91671
N
0.521
PHACADRAFT_250106
Phanerochaete carnosa
PHACADRAFT_250106
N
0.514
e_gwh2.2.1019.1
Phanerochaete chrysosporium
e_gwh2.2.1019.1
N
0.514
FOMPIDRAFT_1116461
Fomitopsis pinicola
FOMPIDRAFT_1116461
N
0.514
POSPLDRAFT_104147
Postia placenta
POSPLDRAFT_104147
N
0.493
LACBIDRAFT_294914
Laccaria bicolor
LACBIDRAFT_294914
N
0.493
BN946_scf185043.g242
Trametes cinnabarina
BN946_scf185043.g242
N
0.486
JAAARDRAFT_96982
Jaapia argillacea
JAAARDRAFT_96982
N
0.476
CERSUDRAFT_111715
Ceriporiopsis subvermispora
CERSUDRAFT_111715
N
0.457
PIIN_07506
Piriformospora indica
PIIN_07506
N
0.453
HETIRDRAFT_439181
Heterobasidion irregulare
HETIRDRAFT_439181
N
0.443
estExt_fgenesh3_kg.C_40392
Heterobasidion annosum
estExt_fgenesh3_kg.C_40392
N
0.443
M408DRAFT_54305
Serendipita vermifera
M408DRAFT_54305
N
0.437
M408DRAFT_53001
Serendipita vermifera
M408DRAFT_53001
N
0.437
SCHCODRAFT_62473
Schizophyllum commune
SCHCODRAFT_62473
N
0.423
VDBG_04589
Verticillium alfalfae
VDBG_04589
I
0.419
VDAG_09161
Verticillium dahliae
VDAG_09161
I
0.419
VDAG_04140
Verticillium dahliae
VDAG_04140
I
0.419
VDBG_04589
Verticillium albo atrum
VDBG_04589
I
0.419
FIBRA_06118
Fibroporia radiculosa
FIBRA_06118
N
0.418
SERLA73DRAFT_131740
Serpula lacrymans
SERLA73DRAFT_131740
I
0.416
MVLG_07162
Microbotryum violaceum
MVLG_07162
I
0.415