SNAPOd2T00016002001 (Oikopleura dioica)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SNAPOd2T00016002001 T335053_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00016002001 Sox 120 194

Links

Other Sox family TFs
Other Oikopleura dioica TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SNAPOd2T00005164001 Oikopleura dioica SNAPOd2T00005164001 N 0.621
SNAPOd2T00016000001 Oikopleura dioica SNAPOd2T00016000001 N 0.523
SINV22588 Solenopsis invicta SINV22588 N 0.489
GB47837 Apis mellifera GB47837 N 0.489
Hsal_13112--XP_624266.1_APIME Harpegnathos saltator Hsal_13112--XP_624266.1_APIME N 0.489
Cflo_05893--XP_624266.1_APIME Camponotus floridanus Cflo_05893--XP_624266.1_APIME N 0.489
cassava23716.valid.m1 Manihot esculenta cassava23716.valid.m1 I 0.470
PK08788.1 Cannabis sativa PK08788.1 N 0.456
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.450
maker-piw_contig_790-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_790-fgenesh-gene-0.2 N 0.439
ENSOGAG00000026034 Otolemur garnettii ENSOGAG00000026034 I 0.433
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.430
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.430
Ca_04825 Cicer arietinum Ca_04825 I 0.429
ACEP16621 Atta cephalotes ACEP16621 N 0.424
HCOI01912600 Haemonchus contortus HCOI01912600 I 0.424
HCOI01913300 Haemonchus contortus HCOI01913300 I 0.424
evm.TU.supercontig_365.4 Carica papaya evm.TU.supercontig_365.4 I 0.424
Gorai.001G198900 Gossypium raimondii Gorai.001G198900 I 0.424
gene13043-v1.0-hybrid Fragaria vesca gene13043-v1.0-hybrid I 0.422
mgf016363m Mimulus guttatus mgf016363m I 0.422
Sb02g032140 Sorghum bicolor Sb02g032140 I 0.417
Si031512m.g Setaria italica Si031512m.g I 0.417
HMGB2 Ochotona princeps ENSOPRG00000010124 I 0.417
PGSC0003DMG400001567 Solanum tuberosum PGSC0003DMG400001567 I 0.417
Solyc02g082700.2 Solanum lycopersicum Solyc02g082700.2 I 0.417
Pavir.Ba01379 Panicum virgatum Pavir.Ba01379 I 0.417
Pavir.Bb02550 Panicum virgatum Pavir.Bb02550 I 0.417