CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AMEC018835
(
Anopheles melas
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
AMEC018835
T335670_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
bbx
M03975_2.00
Drosophila melanogaster
NAACAATDNCATTGTTN
NAACAATGNHATTGTTN
SELEX
Nitta et al.(2015)
bbx_1
0.420
0.470
Cic
M00195_2.00
Mus musculus
NNTGCTGABN
NVTCAGCANN
PBM
Badis et al.(2009)
Cic_3454
0.417
0.394
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMEC018835-PA
Sox
169
234
QRRPMNAFLIFCKRHRTMLKNRFPEENRAISIKLGKWWRMLTTEQKKPFQLLSKEDNRESLEAAES
Links
Other
Sox
family TFs
Other
Anopheles melas
TFs
138 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy