CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMEC018835
(
Anopheles melas
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
AMEC018835
T335670_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
bbx
M03975_2.00
Drosophila melanogaster
NAACAATDNCATTGTTN
NAACAATGNHATTGTTN
SELEX
Nitta et al.(2015)
bbx_1
0.420
0.470
Cic
M00195_2.00
Mus musculus
NNTGCTGABN
NVTCAGCANN
PBM
Badis et al.(2009)
Cic_3454
0.417
0.394
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMEC018835-PA
Sox
169
234
QRRPMNAFLIFCKRHRTMLKNRFPEENRAISIKLGKWWRMLTTEQKKPFQLLSKEDNRESLEAAES
Links
Other
Sox
family TFs
Other
Anopheles melas
TFs
138 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMEM012787
Anopheles merus
AMEM012787
I
0.629
AEPI004245
Anopheles epiroticus
AEPI004245
I
0.565
AQUA002577
Anopheles quadriannulatus
AQUA002577
I
0.565
ACOM034716
Anopheles coluzzii
ACOM034716
I
0.565
AGAP003896
Anopheles gambiae
AGAP003896
I
0.565
AARA009897
Anopheles arabiensis
AARA009897
I
0.565
ACHR004909
Anopheles christyi
ACHR004909
I
0.565
AGAP003897
Anopheles gambiae
AGAP003897
I
0.565
PHUM605170
Pediculus humanus
PHUM605170
I
0.504
NEMVEDRAFT_v1g122926
Nematostella vectensis
NEMVEDRAFT_v1g122926
I
0.502
TELCIR_02356
Teladorsagia circumcincta
TELCIR_02356
I
0.486
ENSLOCG00000004648
Lepisosteus oculatus
ENSLOCG00000004648
I
0.479
DAPPUDRAFT_37735
Daphnia pulex
DAPPUDRAFT_37735
I
0.479
EFV48447
Trichinella spiralis
EFV48447
I
0.479
LotgiG100217
Lottia gigantea
LotgiG100217
I
0.479
NECAME_00080
Necator americanus
NECAME_00080
I
0.474
HelroG148142
Helobdella robusta
HelroG148142
I
0.474
ENSPMAG00000002631
Petromyzon marinus
ENSPMAG00000002631
I
0.466
AMIN000258
Anopheles minimus
AMIN000258
I
0.465
L798_09303
Zootermopsis nevadensis
L798_09303
I
0.460
SMAR001063
Strigamia maritima
SMAR001063
I
0.457
DAPPUDRAFT_313324
Daphnia pulex
DAPPUDRAFT_313324
I
0.455
ENSORLG00000009474
Oryzias latipes
ENSORLG00000009474
I
0.448
AFAF016820
Anopheles farauti
AFAF016820
I
0.435
GB51010
Apis mellifera
GB51010
I
0.432
GL20955
Drosophila persimilis
FBgn0158550
I
0.431
CGI_10003963
Crassostrea gigas
CGI_10003963
I
0.431
HelroG70896
Helobdella robusta
HelroG70896
I
0.428
L798_08623
Zootermopsis nevadensis
L798_08623
I
0.423
ISCW021979
Ixodes scapularis
ISCW021979
I
0.422
GLOINDRAFT_30433
Rhizophagus irregularis
GLOINDRAFT_30433
N
0.421
GF20922
Drosophila ananassae
FBgn0097927
I
0.420
GA16961
Drosophila pseudoobscura
FBgn0076975
I
0.420
bbx
Drosophila melanogaster
FBgn0024251
D
0.420
MDOA012813
Musca domestica
MDOA012813
I
0.420
GG19727
Drosophila erecta
FBgn0111928
I
0.420
LCUP006498
Lucilia cuprina
LCUP006498
I
0.420
GE17925
Drosophila yakuba
FBgn0235361
I
0.420
GK25081
Drosophila willistoni
FBgn0227040
I
0.420
GM23082
Drosophila sechellia
FBgn0177950
I
0.420
GI21541
Drosophila mojavensis
FBgn0144271
I
0.420
GJ16014
Drosophila virilis
FBgn0203199
I
0.420
Ocbimv22001036m.g
Octopus bimaculoides
Ocbimv22001036m.g
I
0.419
L798_14304
Zootermopsis nevadensis
L798_14304
I
0.418
gw.448.64.1
Branchiostoma floridae
gw.448.64.1
I
0.417
Ogr10275
Ophisaurus gracilis
Ogr10275
I
0.417
Myotis_brandtii_Cic_10007129
Myotis brandtii
Myotis_brandtii_Cic_10007129
I
0.417
Pvit_02876
Pogona vitticeps
Pvit_02876
I
0.417
gw.46.292.1
Branchiostoma floridae
gw.46.292.1
I
0.417
HHAL000065-PA
Halyomorpha halys
HHAL000065-PA
I
0.417
CLEC003268
Cimex lectularius
CLEC003268
I
0.417
Sakowv30042695m.g
Saccoglossus kowalevskii
Sakowv30042695m.g
I
0.417
Hsal_08911--XP_624175.2_APIME
Harpegnathos saltator
Hsal_08911--XP_624175.2_APIME
I
0.417
ENSP00000160740-D1
Bos grunniens
ENSP00000160740-D1
I
0.417
TC004697
Tribolium castaneum
TC004697
I
0.417
SPU_025292
Strongylocentrotus purpuratus
SPU_025292
I
0.417
cica
Oryzias latipes
ENSORLG00000007091
I
0.417
Cic
Dipodomys ordii
ENSDORG00000008822
I
0.417
YQE_03282
Dendroctonus ponderosae
YQE_03282
I
0.417
Alligator_sinensis_CCG005631.1
Alligator sinensis
Alligator_sinensis_CCG005631.1
I
0.417
CIC
Dasypus novemcinctus
ENSDNOG00000047657
I
0.417
Cmyd_10001800
Chelonia mydas
Cmyd_10001800
I
0.417
Cflo_01544--XP_624175.2_APIME
Camponotus floridanus
Cflo_01544--XP_624175.2_APIME
I
0.417
ENSP00000160740
Macaca fascicularis
ENSP00000160740
I
0.417
cic
Xenopus tropicalis
XB-GENE-6467430
I
0.417
SBAD_0000026401
Soboliphyme baturini
SBAD_0000026401
I
0.417
nAv.1.0.1.g00032
Acanthocheilonema viteae
nAv.1.0.1.g00032
I
0.417
EVEC_0000011601
Enterobius vermicularis
EVEC_0000011601
I
0.417
D918_06270
Trichuris suis
D918_06270
I
0.417
SMUV_0001072601
Syphacia muris
SMUV_0001072601
I
0.417
SVUK_0000932601
Strongylus vulgaris
SVUK_0000932601
I
0.417
TTRE_0000098801
Trichuris trichiura
TTRE_0000098801
I
0.417
TMUE_s0223001200
Trichuris muris
TMUE_s0223001200
I
0.417
ACYPI004663
Acyrthosiphon pisum
ACYPI004663
I
0.417
D917_02434
Trichinella nativa
D917_02434
I
0.417
CapteG39126
Capitella teleta
CapteG39126
I
0.417
CIC
Canis familiaris
ENSCAFG00000004858
I
0.417
CIC
Callithrix jacchus
ENSCJAG00000012847
I
0.417
ENSCPOG00000004391
Cavia porcellus
ENSCPOG00000004391
I
0.417
cica
Danio rerio
ENSDARG00000071150
I
0.417
ENSBTAG00000019785
Bos taurus
ENSBTAG00000019785
I
0.417
ENSAMXG00000018358
Astyanax mexicanus
ENSAMXG00000018358
I
0.417
BGLB001462
Biomphalaria glabrata
BGLB001462
I
0.417
CGI_10015746
Crassostrea gigas
CGI_10015746
I
0.417
ENSAMXG00000014362
Astyanax mexicanus
ENSAMXG00000014362
I
0.417
RPRC001090
Rhodnius prolixus
RPRC001090
I
0.417
SMAR009315
Strigamia maritima
SMAR009315
I
0.417
ENSOARG00000007985
Ovis aries
ENSOARG00000007985
I
0.417
ENSOCUG00000006458
Oryctolagus cuniculus
ENSOCUG00000006458
I
0.417
CIC
Otolemur garnettii
ENSOGAG00000003964
I
0.417
ENSONIG00000013108
Oreochromis niloticus
ENSONIG00000013108
I
0.417
CIC
Equus caballus
ENSECAG00000011342
I
0.417
ENSMPUG00000007557
Mustela putorius furo
ENSMPUG00000007557
I
0.417
Cic
Mus musculus
ENSMUSG00000005442
D
0.417
ENSNLEG00000010614
Nomascus leucogenys
ENSNLEG00000010614
I
0.417
ENSONIG00000004979
Oreochromis niloticus
ENSONIG00000004979
I
0.417
CIC
Tursiops truncatus
ENSTTRG00000013873
I
0.417
ENSPPYG00000010041
Pongo abelii
ENSPPYG00000010041
I
0.417
Cic
Rattus norvegicus
ENSRNOG00000056118
I
0.417
CIC
Pteropus vampyrus
ENSPVAG00000016806
I
0.417
CIC
Sus scrofa
ENSSSCG00000003030
I
0.417
ENSSTOG00000000852
Ictidomys tridecemlineatus
ENSSTOG00000000852
I
0.417
CIC
Takifugu rubripes
ENSTRUG00000007193
I
0.417
CIC
Tetraodon nigroviridis
ENSTNIG00000003521
I
0.417
CIC
Tupaia belangeri
ENSTBEG00000009044
I
0.417
CIC
Pan troglodytes
ENSPTRG00000011051
I
0.417
ACEP18843
Atta cephalotes
ACEP18843
I
0.417
CIC
Procavia capensis
ENSPCAG00000017001
I
0.417
ENSPFOG00000000116
Poecilia formosa
ENSPFOG00000000116
I
0.417
ENSFCAG00000012737
Felis catus
ENSFCAG00000012737
I
0.417
ENSPFOG00000016231
Poecilia formosa
ENSPFOG00000016231
I
0.417
ENSPANG00000009039
Papio anubis
ENSPANG00000009039
I
0.417
CIC
Echinops telfairi
ENSETEG00000017271
I
0.417
PHUM079880
Pediculus humanus
PHUM079880
I
0.417
NV10910
Nasonia vitripennis
NV10910
I
0.417
cicb
Oryzias latipes
ENSORLG00000013259
I
0.417
ENSMMUG00000012174
Macaca mulatta
ENSMMUG00000012174
I
0.417
CIC
Homo sapiens
ENSG00000079432
I
0.417
ENSMICG00000015176
Microcebus murinus
ENSMICG00000015176
I
0.417
GB43462
Apis mellifera
GB43462
I
0.417
ENSMLUG00000016650
Myotis lucifugus
ENSMLUG00000016650
I
0.417
ENSMEUG00000016625
Macropus eugenii
ENSMEUG00000016625
I
0.417
ENSLACG00000002764
Latimeria chalumnae
ENSLACG00000002764
I
0.417
cicb
Gasterosteus aculeatus
ENSGACG00000009452
I
0.417
CIC
Gorilla gorilla
ENSGGOG00000000192
I
0.417
ENSGMOG00000005167
Gadus morhua
ENSGMOG00000005167
I
0.417
SCUD_0001673101
Schistosoma curassoni
SCUD_0001673101
I
0.416
ADAC009062
Anopheles darlingi
ADAC009062
I
0.416
Sjc_0093980
Schistosoma japonicum
Sjc_0093980
I
0.416
tetur23g01950
Tetranychus urticae
tetur23g01950
I
0.416
Smp_142600
Schistosoma mansoni
Smp_142600
I
0.416
B_00914
Schistosoma haematobium
B_00914
I
0.416
GI22721
Drosophila mojavensis
FBgn0145448
I
0.416
ENSTNIG00000002023
Tetraodon nigroviridis
ENSTNIG00000002023
I
0.416
SMU15002098
Schmidtea mediterranea
SMU15002098
I
0.416
NEMVEDRAFT_v1g120503
Nematostella vectensis
NEMVEDRAFT_v1g120503
I
0.416
L798_09327
Zootermopsis nevadensis
L798_09327
I
0.415
TC007345
Tribolium castaneum
TC007345
I
0.415