MCOS_0000670801 (Mesocestoides corti)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 MCOS_0000670801 T336606_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Sox6
M00828_2.00
Mus musculus
WTTGTNNNN

NNNNACAAW
PBM
Weirauch et al.(2013)
pTH3862
0.444 0.449
SOX6
M05892_2.00
Homo sapiens
DRACAATRVN

NBYATTGTYH
SMiLE-seq
Isakova et al.(2017)
SOX6
0.444 0.449
Sox6
M08169_2.00
Mus musculus
BCWTTGTYYY

RRRACAAWGV
ChIP-seq
Mathelier et al.(2014)
MA0515.1
0.444 0.449
Sox6
M09640_2.00
Mus musculus
BHWTTGTBNN

NNVACAAWDV
Misc
Heinz et al.(2010)
Myotubes-Sox6_GSE32627
0.444 0.449
SOX6
M11300_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SOX6_Q5
0.444 0.449
mat1-Mc
M11340_2.00
Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW

AKRYBTCTTTGTTNNKYN
Transfac
Matys et al.(2006)
F$MAT1MC_01
0.416 0.348
mat1-Mc
M11341_2.00
Schizosaccharomyces pombe
YYHATTGTYD

HRACAATDRR
Transfac
Matys et al.(2006)
F$MAT1MC_02
0.416 0.348
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MCOS_0000670801-mRNA-1 Sox 76 144

Links

Other Sox family TFs
Other Mesocestoides corti TFs

211 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Sox6 Mus musculus ENSMUSG00000051910 D 0.444
mat1-Mc Schizosaccharomyces pombe SPBC23G7.09 D 0.416
SOX6 Homo sapiens ENSG00000110693 D 0.444
Afo_R014568 Aptenodytes forsteri Afo_R014568 I 0.444
Aan_R006554 Calypte anna Aan_R006554 I 0.444
ZBAI_05541 Zygosaccharomyces bailii ZBAI_05541 I 0.419
ZBAI_00389 Zygosaccharomyces bailii ZBAI_00389 I 0.419
TBLA_0J01680 Tetrapisispora blattae TBLA_0J01680 I 0.421
mat3-Mc Schizosaccharomyces pombe SPMTR.04 I 0.416
mat3-Mc Schizosaccharomyces pombe SPBC1711.02 I 0.416
Smp_148110 Schistosoma mansoni Smp_148110 I 0.438
Smp_076600 Schistosoma mansoni Smp_076600 I 0.533
fgenesh2_pg.scaffold_1022000007 Branchiostoma floridae fgenesh2_pg.scaffold_1022000007 I 0.417
Brh_R000892 Buceros rhinoceros Brh_R000892 I 0.444
ENSP00000324948-D1 Bos grunniens ENSP00000324948-D1 I 0.444
fgenesh1_pg.scaffold_41000062 Monosiga brevicollis fgenesh1_pg.scaffold_41000062 I 0.423
Pvit_16139 Pogona vitticeps Pvit_16139 I 0.444
Pvit_06069 Pogona vitticeps Pvit_06069 I 0.417
Ogr18873 Ophisaurus gracilis Ogr18873 I 0.444
Ogr06849 Ophisaurus gracilis Ogr06849 I 0.417
Myotis_brandtii_PLEKHA7_10020549 Myotis brandtii Myotis_brandtii_PLEKHA7_10020549 I 0.444
Gfo_R014696 Geospiza fortis Gfo_R014696 I 0.417
Gfo_R009095 Geospiza fortis Gfo_R009095 I 0.444
ENSP00000356174-D1 Bos grunniens ENSP00000356174-D1 I 0.417
ENSP00000324948 Macaca fascicularis ENSP00000324948 I 0.444
SMAR001063 Strigamia maritima SMAR001063 I 0.426
SERLA73DRAFT_18439 Serpula lacrymans SERLA73DRAFT_18439 I 0.452
Mycgr3G19569 Zymoseptoria tritici Mycgr3G19569 I 0.446
Moror_4096 Moniliophthora roreri Moror_4096 I 0.418
Moror_2098 Moniliophthora roreri Moror_2098 I 0.417
Moror_16414 Moniliophthora roreri Moror_16414 I 0.430
M404DRAFT_56218 Pisolithus tinctorius M404DRAFT_56218 I 0.429
LELG_00108 Lodderomyces elongisporus LELG_00108 I 0.418
LACBIDRAFT_311738 Laccaria bicolor LACBIDRAFT_311738 I 0.446
Kpol_1062p60 Vanderwaltozyma polyspora Kpol_1062p60 I 0.421
KLTH0F13926g Lachancea thermotolerans KLTH0F13926g I 0.481
KAFR_0G02830 Kazachstania africana KAFR_0G02830 I 0.427
K443DRAFT_250430 Laccaria amethystina K443DRAFT_250430 I 0.446
NCAS_0E02010 Naumovozyma castellii NCAS_0E02010 I 0.421
NDAI_0A05180 Naumovozyma dairenensis NDAI_0A05180 I 0.440
SCLCIDRAFT_99844 Scleroderma citrinum SCLCIDRAFT_99844 I 0.422
SCLCIDRAFT_81131 Scleroderma citrinum SCLCIDRAFT_81131 I 0.451
SCHCODRAFT_258194 Schizophyllum commune SCHCODRAFT_258194 I 0.442
SCHCODRAFT_238903 Schizophyllum commune SCHCODRAFT_238903 I 0.427
SCHCODRAFT_230584 Schizophyllum commune SCHCODRAFT_230584 I 0.444
SCHCODRAFT_114945 Schizophyllum commune SCHCODRAFT_114945 I 0.447
SCHCODRAFT_113446 Schizophyllum commune SCHCODRAFT_113446 I 0.447
SCHCODRAFT_111770 Schizophyllum commune SCHCODRAFT_111770 I 0.447
PISMIDRAFT_61859 Pisolithus microcarpus PISMIDRAFT_61859 I 0.429
PAXRUDRAFT_414321 Paxillus rubicundulus PAXRUDRAFT_414321 I 0.429
NDAI_0E03570 Naumovozyma dairenensis NDAI_0E03570 I 0.421
K437DRAFT_265905 Tilletiaria anomala K437DRAFT_265905 I 0.437
TTAC_0000238201 Hydatigera taeniaeformis TTAC_0000238201 I 0.543
SMRZ_0000554201 Schistosoma margrebowiei SMRZ_0000554201 I 0.533
RSKR_0000077800 Rhabditophanes kr3021 RSKR_0000077800 I 0.424
HNAJ_0001105001 Hymenolepis nana HNAJ_0001105001 I 0.547
HNAJ_0000734901 Hymenolepis nana HNAJ_0000734901 I 0.417
HNAJ_0000300301 Hymenolepis nana HNAJ_0000300301 I 0.698
HNAJ_0000181101 Hymenolepis nana HNAJ_0000181101 I 0.532
HmN_000874900 Hymenolepis microstoma HmN_000874900 I 0.547
HmN_000494900 Hymenolepis microstoma HmN_000494900 I 0.532
HmN_000208300 Hymenolepis microstoma HmN_000208300 I 0.705
HmN_000097600 Hymenolepis microstoma HmN_000097600 I 0.417
SPER_0001384501 Spirometra erinaceieuropaei SPER_0001384501 I 0.520
SSLN_0000478001 Schistocephalus solidus SSLN_0000478001 I 0.613
SSLN_0000478501 Schistocephalus solidus SSLN_0000478501 I 0.581
TTAC_0000092501 Hydatigera taeniaeformis TTAC_0000092501 I 0.694
TsM_000714900 Taenia solium TsM_000714900 I 0.699
TsM_000697900 Taenia solium TsM_000697900 I 0.532
TsM_000188900 Taenia solium TsM_000188900 I 0.543
TASK_0001001001 Taenia asiatica TASK_0001001001 I 0.543
TASK_0000873701 Taenia asiatica TASK_0000873701 I 0.699
TASK_0000729701 Taenia asiatica TASK_0000729701 I 0.532
T265_06704 Opisthorchis viverrini T265_06704 I 0.606
T265_01843 Opisthorchis viverrini T265_01843 I 0.525
SSLN_0001637801 Schistocephalus solidus SSLN_0001637801 I 0.520
HDID_0000757301 Hymenolepis diminuta HDID_0000757301 I 0.417
HDID_0000236901 Hymenolepis diminuta HDID_0000236901 I 0.547
e_gw1.5.360.1 Cryphonectria parasitica e_gw1.5.360.1 I 0.426
sox13.S Xenopus laevis XB-GENE-865496 I 0.417
sox6 Xenopus tropicalis XB-GENE-483934 I 0.444
sox13 Xenopus tropicalis XB-GENE-481889 I 0.417
SMU15015648 Schmidtea mediterranea SMU15015648 I 0.574
SMU15001430 Schmidtea mediterranea SMU15001430 I 0.554
SMU15001429 Schmidtea mediterranea SMU15001429 I 0.554
Scas_Contig614.4 Saccharomyces castellii Scas_Contig614.4 I 0.421
B1H349 Xenopus tropicalis B1H349 I 0.444
gw1.2.1019.1 Mycosphaerella graminicola gw1.2.1019.1 I 0.446
gw1.15.231.1 Heterobasidion annosum gw1.15.231.1 I 0.473
Kwal_21061 Kluyveromyces waltii Kwal_21061 I 0.481
SAKL0F03872g Lachancea kluyveri SAKL0F03872g I 0.455
EmuJ_000437800 Echinococcus multilocularis EmuJ_000437800 I 0.532
EmuJ_000232900 Echinococcus multilocularis EmuJ_000232900 I 0.699
ECANG7_10853 Echinococcus canadensis ECANG7_10853 I 0.543
ECANG7_06280 Echinococcus canadensis ECANG7_06280 I 0.699
ECANG7_01540 Echinococcus canadensis ECANG7_01540 I 0.532
DILT_0001026601 Diphyllobothrium latum DILT_0001026601 I 0.613
D917_04099 Trichinella nativa D917_04099 I 0.431
csin107154 Clonorchis sinensis csin107154 I 0.525
csin105999 Clonorchis sinensis csin105999 I 0.606
XP_002160058.1 Hydra magnipapillata XP_002160058.1 I 0.439
KLTH0F13926g Kluyveromyces thermotolerans KLTH0F13926g I 0.481
JAAARDRAFT_33297 Jaapia argillacea JAAARDRAFT_33297 I 0.435
ENSMPUG00000013283 Mustela putorius furo ENSMPUG00000013283 I 0.444
SOX6 Gorilla gorilla ENSGGOG00000010884 I 0.444
SOX6 Gallus gallus ENSGALG00000006074 I 0.444
sox13 Gasterosteus aculeatus ENSGACG00000010931 I 0.417
sox6 Gasterosteus aculeatus ENSGACG00000006649 I 0.438
SOX6 Felis catus ENSFCAG00000002214 I 0.444
ENSFALG00000000798 Ficedula albicollis ENSFALG00000000798 I 0.444
ENSFALG00000000469 Ficedula albicollis ENSFALG00000000469 I 0.417
SOX6 Equus caballus ENSECAG00000010880 I 0.444
SOX13 Dasypus novemcinctus ENSDNOG00000031131 I 0.417
SOX6 Dasypus novemcinctus ENSDNOG00000004344 I 0.444
ENSGMOG00000004316 Gadus morhua ENSGMOG00000004316 I 0.417
ENSGMOG00000009040 Gadus morhua ENSGMOG00000009040 I 0.444
ENSLACG00000008711 Latimeria chalumnae ENSLACG00000008711 I 0.417
SOX6 Monodelphis domestica ENSMODG00000007224 I 0.444
SOX6 Macaca mulatta ENSMMUG00000002753 I 0.444
SOX13 Anolis carolinensis ENSACAG00000010028 I 0.417
SOX6 Myotis lucifugus ENSMLUG00000007911 I 0.444
ENSMICG00000008914 Microcebus murinus ENSMICG00000008914 I 0.444
SOX6 Meleagris gallopavo ENSMGAG00000006785 I 0.444
ENSMEUG00000010268 Macropus eugenii ENSMEUG00000010268 I 0.444
ENSLOCG00000003065 Lepisosteus oculatus ENSLOCG00000003065 I 0.444
ENSLOCG00000000321 Lepisosteus oculatus ENSLOCG00000000321 I 0.417
ENSLACG00000017676 Latimeria chalumnae ENSLACG00000017676 I 0.444
sox13 Danio rerio ENSDARG00000030297 I 0.417
sox6 Danio rerio ENSDARG00000015536 I 0.438
DICSQDRAFT_32143 Dichomitus squalens DICSQDRAFT_32143 I 0.437
DEHA2E09460g Debaryomyces hansenii DEHA2E09460g I 0.425
CANTEDRAFT_136140 Candida tenuis CANTEDRAFT_136140 I 0.432
CAGL0D05434g Candida glabrata CAGL0D05434g I 0.442
ANIA_03667 Aspergillus nidulans CADANIAG00005066 I 0.425
CADANGAG00000780 Aspergillus niger CADANGAG00000780 I 0.419
BN946_scf184829.g29 Trametes cinnabarina BN946_scf184829.g29 I 0.433
AGOS_AAR026W Ashbya gossypii AGOS_AAR026W I 0.465
AACERI_AaceriAAR026W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAR026W I 0.465
A1O3_02036 Capronia epimyces A1O3_02036 I 0.415
Ecym_1257 Eremothecium cymbalariae Ecym_1257 I 0.465
EFV52295 Trichinella spiralis EFV52295 I 0.431
SOX6 Anolis carolinensis ENSACAG00000012782 I 0.444
ENSCSAG00000004751 Chlorocebus sabaeus ENSCSAG00000004751 I 0.444
SOX6 Cavia porcellus ENSCPOG00000012090 I 0.444
SOX13 Cavia porcellus ENSCPOG00000006604 I 0.417
SOX6 Callithrix jacchus ENSCJAG00000009643 I 0.444
SOX6 Canis familiaris ENSCAFG00000008607 I 0.444
SOX6 Bos taurus ENSBTAG00000044185 I 0.444
SOX13 Bos taurus ENSBTAG00000008132 I 0.417
ENSAPLG00000008744 Anas platyrhynchos ENSAPLG00000008744 I 0.444
ENSAMXG00000006474 Astyanax mexicanus ENSAMXG00000006474 I 0.444
ENSAMEG00000015112 Ailuropoda melanoleuca ENSAMEG00000015112 I 0.444
A1O1_00170 Capronia coronata A1O1_00170 I 0.415
HMPREF1120_05727 Exophiala dermatitidis HMPREF1120_05727 I 0.415
sox6 Takifugu rubripes ENSTRUG00000017299 I 0.417
sox6 Takifugu rubripes ENSTRUG00000014656 I 0.438
sox13 Takifugu rubripes ENSTRUG00000000156 I 0.417
sox6 Tetraodon nigroviridis ENSTNIG00000009384 I 0.417
sox13 Tetraodon nigroviridis ENSTNIG00000007374 I 0.417
ENSTNIG00000004906 Tetraodon nigroviridis ENSTNIG00000004906 I 0.417
SOX6 Taeniopygia guttata ENSTGUG00000008522 I 0.444
ENSSTOG00000013609 Ictidomys tridecemlineatus ENSSTOG00000013609 I 0.444
ENSSSCG00000030418 Sus scrofa ENSSSCG00000030418 I 0.444
ENSSHAG00000006502 Sarcophilus harrisii ENSSHAG00000006502 I 0.444
SOX6 Sorex araneus ENSSARG00000011926 I 0.444
ENSTSYG00000007395 Tarsius syrichta ENSTSYG00000007395 I 0.444
SOX6 Tursiops truncatus ENSTTRG00000003214 I 0.444
JAAARDRAFT_196285 Jaapia argillacea JAAARDRAFT_196285 I 0.433
HETIRDRAFT_18754 Heterobasidion irregulare HETIRDRAFT_18754 I 0.473
HelroG153549 Helobdella robusta HelroG153549 I 0.420
GNLVRS01_PISO0L11913g Millerozyma farinosa GNLVRS01_PISO0L11913g I 0.425
GNLVRS01_PISO0K11912g Millerozyma farinosa GNLVRS01_PISO0K11912g I 0.425
GLOTRDRAFT_28355 Gloeophyllum trabeum GLOTRDRAFT_28355 I 0.436
GLOINDRAFT_47695 Rhizophagus irregularis GLOINDRAFT_47695 I 0.451
GALMADRAFT_33159 Galerina marginata GALMADRAFT_33159 I 0.426
ENSXMAG00000012894 Xiphophorus maculatus ENSXMAG00000012894 I 0.438
ENSXMAG00000008855 Xiphophorus maculatus ENSXMAG00000008855 I 0.417
ENSXMAG00000007070 Xiphophorus maculatus ENSXMAG00000007070 I 0.417
SOX6 Vicugna pacos ENSVPAG00000003132 I 0.444
Sox6 Rattus norvegicus ENSRNOG00000020514 I 0.444
SOX6 Oryctolagus cuniculus ENSOCUG00000012557 I 0.444
sox6b Oryzias latipes ENSORLG00000006705 I 0.417
ENSOARG00000002079 Ovis aries ENSOARG00000002079 I 0.417
sox6a Oryzias latipes ENSORLG00000001260 I 0.444
ENSOARG00000005819 Ovis aries ENSOARG00000005819 I 0.444
SOX6 Ochotona princeps ENSOPRG00000003350 I 0.444
ENSONIG00000020233 Oreochromis niloticus ENSONIG00000020233 I 0.417
ENSONIG00000015539 Oreochromis niloticus ENSONIG00000015539 I 0.438
ENSONIG00000006148 Oreochromis niloticus ENSONIG00000006148 I 0.417
SOX6 Otolemur garnettii ENSOGAG00000005358 I 0.444
SOX13 Oryctolagus cuniculus ENSOCUG00000023464 I 0.417
sox13 Oryzias latipes ENSORLG00000012066 I 0.417
ENSPANG00000025558 Papio anubis ENSPANG00000025558 I 0.444
SOX6 Pteropus vampyrus ENSPVAG00000011735 I 0.444
SOX6 Pan troglodytes ENSPTRG00000003393 I 0.425
ENSPSIG00000009027 Pelodiscus sinensis ENSPSIG00000009027 I 0.444
ENSPPYG00000003459 Pongo abelii ENSPPYG00000003459 I 0.444
ENSPMAG00000007384 Petromyzon marinus ENSPMAG00000007384 I 0.417
ENSNLEG00000017716 Nomascus leucogenys ENSNLEG00000017716 I 0.444
ENSPFOG00000007860 Poecilia formosa ENSPFOG00000007860 I 0.438
ENSPFOG00000006435 Poecilia formosa ENSPFOG00000006435 I 0.417
SOX6 Ornithorhynchus anatinus ENSOANG00000022345 I 0.444
ENSPFOG00000004787 Poecilia formosa ENSPFOG00000004787 I 0.417
LDEC020265 Leptinotarsa decemlineata LDEC020265 N 0.424
ECPE_0001194001 Echinostoma caproni ECPE_0001194001 N 0.446
Sjc_0119940 Schistosoma japonicum Sjc_0119940 N 0.455
SMRZ_0002061501 Schistosoma margrebowiei SMRZ_0002061501 N 0.455
SCUD_0001126301 Schistosoma curassoni SCUD_0001126301 N 0.455
A_00545 Schistosoma haematobium A_00545 N 0.461
D915_01276 Fasciola hepatica D915_01276 N 0.446
SMTD_0001685201 Schistosoma mattheei SMTD_0001685201 N 0.455