CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g02804
(
Acanthocheilonema viteae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
nAv.1.0.1.g02804
T336635_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t02804-RA
Sox
45
99
TTPLSLFIKENFASRKNEQPTKIFSNLIKQWKSLDEADKGKYVDEALRINEERRS
nAv.1.0.1.t02804-RA
Sox
92
120
RINEERRSKFEAMSETEKEELRRRAKNLK
nAv.1.0.1.t02804-RA
Sox
141
197
QRPMSGWMLFVKEKAVKGAADTGKKQQDIIKELAIVWKSLPKSDKDMYSERAKDFSK
Links
Other
Sox
family TFs
Other
Acanthocheilonema viteae
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nDi.2.2.2.g04831
Dirofilaria immitis
nDi.2.2.2.g04831
N
0.637
WBGene00241245
Onchocerca volvulus
WBGene00241245
N
0.598
LOAG_01462
Loa loa
LOAG_01462
N
0.595
OFLC_0001245101
Onchocerca flexuosa
OFLC_0001245101
N
0.595
nOo.2.0.1.g05020
Onchocerca ochengi
nOo.2.0.1.g05020
N
0.592
EEL_0001019701
Elaeophora elaphi
EEL_0001019701
N
0.585