CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
nOo.2.0.1.g05020
(
Onchocerca ochengi
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
nOo.2.0.1.g05020
T336733_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nOo.2.0.1.t05020-RA
Sox
40
92
KTTPFSLFIKENFASRKNEQPTEVFSNLTKQWKNLNEADKMKYVDEASRINEE
nOo.2.0.1.t05020-RA
Sox
87
116
SRINEEKRSKFESMSETEKEELREQAKNLR
nOo.2.0.1.t05020-RA
Sox
135
181
QRQMSGWMLFVKEKAVKGVADIGKKQQDIIRELAVVWKSLPKSEKDR
Links
Other
Sox
family TFs
Other
Onchocerca ochengi
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WBGene00241245
Onchocerca volvulus
WBGene00241245
N
0.733
OFLC_0001245101
Onchocerca flexuosa
OFLC_0001245101
N
0.718
nDi.2.2.2.g04831
Dirofilaria immitis
nDi.2.2.2.g04831
N
0.679
LOAG_01462
Loa loa
LOAG_01462
N
0.674
EEL_0001019701
Elaeophora elaphi
EEL_0001019701
N
0.665
nAv.1.0.1.g02804
Acanthocheilonema viteae
nAv.1.0.1.g02804
N
0.592