CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
tbx6
(
Tetraodon nigroviridis
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSTNIG00000015212
T340533_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000018270
T-box
70
249
VELENASLWKQFSSVGTEMIITKKGRRMFPGLRLKLSGLNPSLRYILLLDILPADNSRYRFQGGSWQAVGGAEARLPDRVFIHPDSPATGAHWQSRTVSFHHAKLTNNTLDTRGHIILHSLHRYQPRVHVIEARDVLRWGGGQHSFVFPETQFITVTAYQNNKITELKINANPFAKGFRE
Links
Other
T-box
family TFs
Other
Tetraodon nigroviridis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSTRUG00000008789
Takifugu rubripes
ENSTRUG00000008789
N
0.906
ENSXMAG00000013802
Xiphophorus maculatus
ENSXMAG00000013802
N
0.884
ENSPFOG00000004756
Poecilia formosa
ENSPFOG00000004756
N
0.884
ENSORLG00000006272
Oryzias latipes
ENSORLG00000006272
N
0.880
ENSONIG00000011439
Oreochromis niloticus
ENSONIG00000011439
N
0.863
tbx6
Danio rerio
ENSDARG00000011785
N
0.843