ENSXMAG00000013655 (Xiphophorus maculatus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSXMAG00000013655 T340621_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Eomes
M00215_2.00 		Mus musculus
RDGTGYBANN
NNTVRCACHY		 PBM
Badis et al.(2009)
Eomes_0921 		0.885 0.798
EOMES
M03563_2.00 		Homo sapiens
DAGGTGTGAWNNN
NNNWTCACACCTH		 SELEX
Jolma et al.(2013)
EOMES_1 		0.885 0.792
EOMES
M03564_2.00 		Homo sapiens
TVACACNTNNNDRNGTGTGA
TCACACNYHNNNANGTGTBA		 SELEX
Jolma et al.(2013)
EOMES_2 		0.885 0.792
EOMES
M02752_2.00 		Homo sapiens
AGGTGTGAW
WTCACACCT		 SELEX
Jolma et al.(2010)
EOMES_monomer 		0.885 0.792
EOMES
M05807_2.00 		Homo sapiens
DAGGTGTGAN
NTCACACCTH		 SELEX
Yin et al.(2017)
EOMES_eDBD_HT-SELEX 		0.885 0.792
EOMES
M09647_2.00 		Homo sapiens
ARGTGWKAAN
NTTMWCACYT		 Misc
Heinz et al.(2010)
H9-Eomes_GSE26097 		0.885 0.792
EOMES
M05808_2.00 		Homo sapiens
NABGTGYKAH
DTMRCACVTN		 SELEX
Yin et al.(2017)
EOMES_eDBD_Methyl-HT-SELEX 		0.885 0.792
Tbr1
M01028_2.00 		Mus musculus
DTVRCAMNYH
DRNKTGYBAH		 PBM
SebePedros et al.(2013)
pTH2659 		0.870 0.798
TBR1
M03560_2.00 		Homo sapiens
AGGTGTGAAN
NTTCACACCT		 SELEX
Jolma et al.(2013)
TBR1_1 		0.870 0.798
TBR1
M03561_2.00 		Homo sapiens
RAGGTGTGAAH
DTTCACACCTY		 SELEX
Jolma et al.(2013)
TBR1_2 		0.870 0.798
TBX21
M03546_2.00 		Homo sapiens
GGTGTGAHDTMACACY
RGTGTKAHDTCACACC		 SELEX
Jolma et al.(2013)
TBX21_1 		0.792 0.765
TBX21
M03547_2.00 		Homo sapiens
DAGGTGTGAW
WTCACACCTH		 SELEX
Jolma et al.(2013)
TBX21_2 		0.792 0.765
TBX21
M03548_2.00 		Homo sapiens
TMACACYTNNDAGGTGTGA
TCACACCTHNNARGTGTKA		 SELEX
Jolma et al.(2013)
TBX21_3 		0.792 0.765
TBX21
M03549_2.00 		Homo sapiens
GGTGTGAWATCACACC
GGTGTGATWTCACACC		 SELEX
Jolma et al.(2013)
TBX21_4 		0.792 0.765
TBX21
M03550_2.00 		Homo sapiens
DAGGTGTGAW
WTCACACCTH		 SELEX
Jolma et al.(2013)
TBX21_5 		0.792 0.765
TBX21
M03551_2.00 		Homo sapiens
TSACACCWNMRAGGTGTGA
TCACACCTYKNWGGTGTSA		 SELEX
Jolma et al.(2013)
TBX21_6 		0.792 0.765
TBX21
M05793_2.00 		Homo sapiens
DAGGTGTKAN
NTMACACCTH		 SELEX
Yin et al.(2017)
TBX21_eDBD_HT-SELEX 		0.792 0.765
TBX21
M09425_2.00 		Homo sapiens
NDSDRGSTGWBRN
NYVWCASCYHSHN		 Misc
Kulakovskiy et al.(2013)
TBX21_HUMAN.H11MO.0.A 		0.792 0.765
TBX21
M05794_2.00 		Homo sapiens
DASGTGTKAW
WTMACACSTH		 SELEX
Yin et al.(2017)
TBX21_eDBD_Methyl-HT-SELEX 		0.792 0.765
Tbx21
M09428_2.00 		Mus musculus
DNDDSTGWSDND
HNHSWCASHHNH		 Misc
Kulakovskiy et al.(2013)
TBX21_MOUSE.H11MO.0.A 		0.792 0.760
Tbx21
M09648_2.00 		Mus musculus
ADGTGWSAHN
NDTSWCACHT		 Misc
Heinz et al.(2010)
CD8-Tbet_GSE33802 		0.792 0.760
A0A075Q982_PATMI
M00734_2.00 		Patiria miniata
NAGGTGTBAN
NTVACACCTN		 PBM
Cheatle-Jarvela et al.(2014)
PmTbr 		0.772 0.607
XP_001195863
M02498_2.00 		Strongylocentrotus purpuratus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2014)
pTH9340 		0.742 0.552
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000013690 T-box 154 341

Links

Other T-box family TFs
Other Xiphophorus maculatus TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000007717 Ailuropoda melanoleuca ENSAMEG00000007717 I 0.000
HOMEZ Bos taurus ENSBTAG00000032686 I 0.000
HOMEZ Canis familiaris ENSCAFG00000011468 I 0.000
ACIN1 Callithrix jacchus ENSCJAG00000008076 I 0.000
ENSCPOG00000025949 Cavia porcellus ENSCPOG00000025949 I 0.000
ENSCSAG00000016052 Chlorocebus sabaeus ENSCSAG00000016052 I 0.000
HOMEZ Dasypus novemcinctus ENSDNOG00000040503 I 0.000
HOMEZ Felis catus ENSFCAG00000030011 I 0.000
HOMEZ Homo sapiens ENSG00000215271 D 0.000
HOMEZ Gorilla gorilla ENSGGOG00000002195 I 0.000
HOMEZ Myotis lucifugus ENSMLUG00000004922 I 0.000
HOMEZ Macaca mulatta ENSMMUG00000014744 I 0.000
ENSMMUP00000019353 Macaca fascicularis ENSMMUP00000019353 I 0.000
HOMEZ Monodelphis domestica ENSMODG00000024443 I 0.000
ENSMPUG00000006797 Mustela putorius furo ENSMPUG00000006797 I 0.000
Homez Mus musculus ENSMUSG00000057156 D 0.000
HOMEZ Ornithorhynchus anatinus ENSOANG00000007642 I 0.000
ENSOARG00000019342 Ovis aries ENSOARG00000019342 I 0.000
HOMEZ Oryctolagus cuniculus ENSOCUG00000012510 I 0.000
HOMEZ Otolemur garnettii ENSOGAG00000032616 I 0.000
ENSPANG00000004893 Papio anubis ENSPANG00000004893 I 0.000
HOMEZ Procavia capensis ENSPCAG00000005821 I 0.000
ENSPPYG00000005662 Pongo abelii ENSPPYG00000005662 I 0.000
HOMEZ Pan troglodytes ENSPTRG00000006165 I 0.000
Homez Rattus norvegicus ENSRNOG00000014887 I 0.000
ENSSHAG00000014748 Sarcophilus harrisii ENSSHAG00000014748 I 0.000
HOMEZ Sus scrofa ENSSSCG00000028190 I 0.000
ENSSTOG00000020653 Ictidomys tridecemlineatus ENSSTOG00000020653 I 0.000
ENSTSYG00000004720 Tarsius syrichta ENSTSYG00000004720 I 0.000
Myotis_brandtii_HOMEZ_10009432 Myotis brandtii Myotis_brandtii_HOMEZ_10009432 I 0.000