Brh_R013163 (Buceros rhinoceros)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 Brh_R013163 T341023_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbx4
M00831_2.00 		Mus musculus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2013)
pTH3973 		0.105 1.000
Tbx5
M00833_2.00 		Mus musculus
AGGTGTBA
TVACACCT		 PBM
Weirauch et al.(2013)
pTH3775 		0.105 1.000
TBX4
M03558_2.00 		Homo sapiens
AGGTGTBA
TVACACCT		 SELEX
Jolma et al.(2013)
TBX4_1 		0.105 1.000
TBX4
M03559_2.00 		Homo sapiens
AGGTGTBANWWNTVACACBT
AVGTGTBANWWNTVACACCT		 SELEX
Jolma et al.(2013)
TBX4_2 		0.105 1.000
TBX5
M03552_2.00 		Homo sapiens
AGGTGTBA
TVACACCT		 SELEX
Jolma et al.(2013)
TBX5_1 		0.105 1.000
TBX5
M03553_2.00 		Homo sapiens
AGGTGTKANWWNTVACACCT
AGGTGTBANWWNTMACACCT		 SELEX
Jolma et al.(2013)
TBX5_2 		0.105 1.000
Tbx5
M09649_2.00 		Mus musculus
AGGTGHBA
TVDCACCT		 Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529 		0.105 1.000
TBX5
M11374_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_01 		0.105 1.000
TBX5
M11375_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_02 		0.105 1.000
Tbx5
M11387_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_05 		0.105 1.000
TBX5
M11376_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_Q2 		0.105 1.000
TBX5
M11377_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX5_Q5 		0.105 1.000
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R013163 T-box 1 17

Links

Other T-box family TFs
Other Buceros rhinoceros TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LOAG_18576 Loa loa LOAG_18576 N 0.911
SMRZ_0000901601 Schistosoma margrebowiei SMRZ_0000901601 I 0.911
SCUD_0001668701 Schistosoma curassoni SCUD_0001668701 I 0.911
WUBG_11141 Wuchereria bancrofti WUBG_11141 N 0.911
augustus_masked-nMf.1.1.scaf40912-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf40912-processed-gene-0.0 N 0.911
NEMVEDRAFT_v1g200081 Nematostella vectensis NEMVEDRAFT_v1g200081 N 0.905
ENSTGUG00000007802 Taeniopygia guttata ENSTGUG00000007802 I 0.892
Tal_R008745 Tyto alba Tal_R008745 N 0.892
ENSACAG00000001033 Anolis carolinensis ENSACAG00000001033 I 0.892
ENSTGUG00000013956 Taeniopygia guttata ENSTGUG00000013956 N 0.884
ENSDNOG00000008614 Dasypus novemcinctus ENSDNOG00000008614 N 0.884
TCNE_0000641501 Toxocara canis TCNE_0000641501 N 0.855
nDi.2.2.2.g08784 Dirofilaria immitis nDi.2.2.2.g08784 N 0.855
nLs.2.1.2.g03986 Litomosoides sigmodontis nLs.2.1.2.g03986 N 0.855
BTMF_0001772901 Brugia timori BTMF_0001772901 N 0.855
nOo.2.0.1.g07550 Onchocerca ochengi nOo.2.0.1.g07550 N 0.855
ACEP16058 Atta cephalotes ACEP16058 N 0.850
ENSOARG00000011096 Ovis aries ENSOARG00000011096 N 0.850
Minc16694 Meloidogyne incognita Minc16694 N 0.841
TCLT_0000604201 Thelazia callipaeda TCLT_0000604201 N 0.814
DILT_0001799701 Diphyllobothrium latum DILT_0001799701 N 0.808
SROB_0001443501 Schistosoma rodhaini SROB_0001443501 N 0.798
EEL_0001013401 Elaeophora elaphi EEL_0001013401 N 0.798
nOo.2.0.1.g12774 Onchocerca ochengi nOo.2.0.1.g12774 N 0.779
Hsal_09270--XP_394607.3_APIME Harpegnathos saltator Hsal_09270--XP_394607.3_APIME N 0.771
CJA31660 Caenorhabditis japonica CJA31660 N 0.760
EVEC_0000447801 Enterobius vermicularis EVEC_0000447801 N 0.749
ENSXMAG00000005990 Xiphophorus maculatus ENSXMAG00000005990 N 0.618
Alligator_sinensis_CCG002049.1 Alligator sinensis Alligator_sinensis_CCG002049.1 I 0.105
ENSAPLG00000008848 Anas platyrhynchos ENSAPLG00000008848 I 0.105
ENSAMXG00000001540 Astyanax mexicanus ENSAMXG00000001540 I 0.105
ENSFALG00000005474 Ficedula albicollis ENSFALG00000005474 I 0.105
TBX4 Meleagris gallopavo ENSMGAG00000007617 I 0.105
ENSONIG00000013614 Oreochromis niloticus ENSONIG00000013614 I 0.105
tbx5 Oryzias latipes ENSORLG00000008185 I 0.105