csin107376 (Clonorchis sinensis)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 csin107376 T341638_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbx2
M00830_2.00
Mus musculus
NYVDCACBHN

NDVGTGHBRN
PBM
Weirauch et al.(2013)
pTH3751
0.775 0.676
TBX2
M03556_2.00
Homo sapiens
GGTGTKADDWNTVACACB

VGTGTBANWHHTMACACC
SELEX
Jolma et al.(2013)
TBX2_1
0.775 0.676
TBX2
M03557_2.00
Homo sapiens
NAGGTGTBAWN

NWTVACACCTN
SELEX
Jolma et al.(2013)
TBX2_2
0.775 0.676
TBX2
M05799_2.00
Homo sapiens
NNVRCRCNNN

NNNGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX
0.775 0.676
Tbx2
M08044_2.00
Mus musculus
GCHYBCTGGGADHTGTAGTYH

DRACTACADHTCCCAGVRDGC
ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2
0.775 0.676
TBX2
M11381_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q2
0.775 0.676
TBX2
M11382_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q5
0.775 0.676
TBX2
M05800_2.00
Homo sapiens
NNVRCRCBNN

NNVGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX
0.775 0.676
Tbx3
M00834_2.00
Mus musculus
NHNDCACNHN

NDNGTGHNDN
PBM
Weirauch et al.(2013)
pTH3998
0.773 0.665
TBX3
M05801_2.00
Homo sapiens
NDSGTGTBRN

NYVACACSHN
SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX
0.773 0.665
TBX3
M09426_2.00
Homo sapiens
DVDGGTGBNAR

YTNVCACCHBH
Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C
0.773 0.665
Tbx3
M09429_2.00
Mus musculus
RRGGTGBBR

YVVCACCYY
Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B
0.773 0.665
TBX3
M05802_2.00
Homo sapiens
DAGGTGTKAN

NTMACACCTH
SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX
0.773 0.665
estExt_fgenesh2_pg.C_1570024
M01030_2.00
Branchiostoma floridae
NHNDCACNHN

NDNGTGHNDN
PBM
SebePedros et al.(2013)
pTH9244
0.767 0.615
XP_008203914.1
M01029_2.00
Nasonia vitripennis
AGGTGTBA

TVACACCT
PBM
SebePedros et al.(2013)
pTH9336
0.763 0.665
TBX2
M02496_2.00
Takifugu rubripes
DAGGTGTBRN

NYVACACCTH
PBM
Weirauch et al.(2014)
pTH9289
0.761 0.676
TBX2
M02495_2.00
Gasterosteus aculeatus
NNVDCACNHN

NDNGTGHBNN
PBM
Weirauch et al.(2014)
pTH9182
0.761 0.670
Tbx5
M00833_2.00
Mus musculus
AGGTGTBA

TVACACCT
PBM
Weirauch et al.(2013)
pTH3775
0.744 0.588
TBX5
M03552_2.00
Homo sapiens
AGGTGTBA

TVACACCT
SELEX
Jolma et al.(2013)
TBX5_1
0.744 0.588
TBX5
M03553_2.00
Homo sapiens
AGGTGTKANWWNTVACACCT

AGGTGTBANWWNTMACACCT
SELEX
Jolma et al.(2013)
TBX5_2
0.744 0.588
Tbx5
M09649_2.00
Mus musculus
AGGTGHBA

TVDCACCT
Misc
Heinz et al.(2010)
HL1-Tbx5.biotin_GSE21529
0.744 0.588
TBX5
M11374_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_01
0.744 0.588
TBX5
M11375_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_02
0.744 0.588
Tbx5
M11387_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_05
0.744 0.588
TBX5
M11376_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q2
0.744 0.588
TBX5
M11377_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX5_Q5
0.744 0.588
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
csin107376 T-box 261 442

Links

Other T-box family TFs
Other Clonorchis sinensis TFs

224 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
T265_09372 Opisthorchis viverrini T265_09372 I 0.920
Smp_163240 Schistosoma mansoni Smp_163240 I 0.865
fgenesh2_pg.scaffold_89000016 Branchiostoma floridae fgenesh2_pg.scaffold_89000016 I 0.788
ENSXMAG00000000486 Xiphophorus maculatus ENSXMAG00000000486 I 0.784
ENSLACG00000015364 Latimeria chalumnae ENSLACG00000015364 I 0.784
Pvit_13524 Pogona vitticeps Pvit_13524 I 0.784
tetur33g01070 Tetranychus urticae tetur33g01070 I 0.782
ENSAMXG00000001528 Astyanax mexicanus ENSAMXG00000001528 I 0.782
TBX2 Taeniopygia guttata ENSTGUG00000007813 I 0.782
tbx3 Xenopus tropicalis XB-GENE-1018231 I 0.782
tbx2b Danio rerio ENSDARG00000006120 I 0.782
tbx3.L Xenopus laevis XB-GENE-6252891 I 0.782
tbx3.S Xenopus laevis XB-GENE-1018237 I 0.782
ACYPI000143 Acyrthosiphon pisum ACYPI000143 I 0.781
TTRE_0000604401 Trichuris trichiura TTRE_0000604401 I 0.780
D918_00588 Trichuris suis D918_00588 I 0.780
TMUE_s0121001900 Trichuris muris TMUE_s0121001900 I 0.780
ECANG7_08267 Echinococcus canadensis ECANG7_08267 I 0.777
EmuJ_000247100 Echinococcus multilocularis EmuJ_000247100 I 0.777
TBX2 Tursiops truncatus ENSTTRG00000004541 I 0.775
ENSMEUG00000010232 Macropus eugenii ENSMEUG00000010232 I 0.775
ENSFALG00000005458 Ficedula albicollis ENSFALG00000005458 I 0.775
ENSLOCG00000005074 Lepisosteus oculatus ENSLOCG00000005074 I 0.775
TBX2 Monodelphis domestica ENSMODG00000014204 I 0.775
TBX2 Otolemur garnettii ENSOGAG00000014815 I 0.775
tbx2b Gasterosteus aculeatus ENSGACG00000020309 I 0.775
ENSGALG00000023577 Gallus gallus ENSGALG00000023577 I 0.775
ENSSHAG00000012290 Sarcophilus harrisii ENSSHAG00000012290 I 0.775
ENSPSIG00000017536 Pelodiscus sinensis ENSPSIG00000017536 I 0.775
TBX2 Sus scrofa ENSSSCG00000027060 I 0.775
ENSSTOG00000009350 Ictidomys tridecemlineatus ENSSTOG00000009350 I 0.775
TBX2 Loxodonta africana ENSLAFG00000006596 I 0.775
TBX2 Ochotona princeps ENSOPRG00000012183 I 0.775
TBX2 Homo sapiens ENSG00000121068 D 0.775
Alligator_sinensis_CCG002051.1 Alligator sinensis Alligator_sinensis_CCG002051.1 I 0.775
tbx2a Danio rerio ENSDARG00000018025 I 0.775
TBX2 Myotis lucifugus ENSMLUG00000011673 I 0.775
ENSCPOG00000001042 Cavia porcellus ENSCPOG00000001042 I 0.775
ENSMMUG00000009859 Macaca mulatta ENSMMUG00000009859 I 0.775
Tbx2 Mus musculus ENSMUSG00000000093 D 0.775
Ogr11256 Ophisaurus gracilis Ogr11256 I 0.775
ENSMPUG00000015118 Mustela putorius furo ENSMPUG00000015118 I 0.775
TBX2 Bos taurus ENSBTAG00000014278 I 0.775
tbx2 Xenopus tropicalis XB-GENE-1018115 I 0.775
ENSNLEG00000000423 Nomascus leucogenys ENSNLEG00000000423 I 0.775
ENSAMEG00000008826 Ailuropoda melanoleuca ENSAMEG00000008826 I 0.775
TBX2 Microcebus murinus ENSMICG00000016649 I 0.775
ENSAMXG00000007070 Astyanax mexicanus ENSAMXG00000007070 I 0.775
TBX2 Pan troglodytes ENSPTRG00000009489 I 0.775
tbx2.L Xenopus laevis XB-GENE-1018122 I 0.775
ENSMPUG00000002720 Mustela putorius furo ENSMPUG00000002720 I 0.773
ENSPPYG00000004995 Pongo abelii ENSPPYG00000004995 I 0.773
TBX3 Ochotona princeps ENSOPRG00000004462 I 0.773
TBX3 Oryctolagus cuniculus ENSOCUG00000014595 I 0.773
ENSOARG00000006249 Ovis aries ENSOARG00000006249 I 0.773
TBX3 Ornithorhynchus anatinus ENSOANG00000007095 I 0.773
TBX3 Otolemur garnettii ENSOGAG00000016212 I 0.773
ENSNLEG00000000224 Nomascus leucogenys ENSNLEG00000000224 I 0.773
Tbx3 Mus musculus ENSMUSG00000018604 D 0.773
bi Drosophila virilis FBgn0020983 I 0.773
Cmyd_10018098 Chelonia mydas Cmyd_10018098 I 0.773
Alligator_sinensis_CCG008095.1 Alligator sinensis Alligator_sinensis_CCG008095.1 I 0.773
Afo_R010397 Aptenodytes forsteri Afo_R010397 I 0.773
TriadG59753 Trichoplax adhaerens TriadG59753 I 0.773
ENSBTAP00000028930-D1 Bos grunniens ENSBTAP00000028930-D1 I 0.773
ENSP00000257566 Macaca fascicularis ENSP00000257566 I 0.773
Pvit_16429 Pogona vitticeps Pvit_16429 I 0.773
Ogr02099 Ophisaurus gracilis Ogr02099 I 0.773
Myotis_brandtii_Tbx3_10028216 Myotis brandtii Myotis_brandtii_Tbx3_10028216 I 0.773
Gfo_R010838 Geospiza fortis Gfo_R010838 I 0.773
GA22741 Drosophila pseudoobscura FBgn0244144 I 0.773
GE16345 Drosophila yakuba FBgn0233875 I 0.773
ENSSTOG00000009817 Ictidomys tridecemlineatus ENSSTOG00000009817 I 0.773
TBX3 Sus scrofa ENSSSCG00000009865 I 0.773
ENSSHAG00000004253 Sarcophilus harrisii ENSSHAG00000004253 I 0.773
Tbx3 Rattus norvegicus ENSRNOG00000008706 I 0.773
TBX3 Tupaia belangeri ENSTBEG00000014612 I 0.773
ENSTSYG00000008994 Tarsius syrichta ENSTSYG00000008994 I 0.773
GK15734 Drosophila willistoni FBgn0217737 I 0.773
GM12345 Drosophila sechellia FBgn0167282 I 0.773
GL14298 Drosophila persimilis FBgn0151903 I 0.773
bi Drosophila melanogaster FBgn0000179 I 0.773
TBX3 Pan troglodytes ENSPTRG00000023749 I 0.773
ENSPANG00000008730 Papio anubis ENSPANG00000008730 I 0.773
TBX3 Homo sapiens ENSG00000135111 D 0.773
ENSFALG00000007792 Ficedula albicollis ENSFALG00000007792 I 0.773
TBX3 Erinaceus europaeus ENSEEUG00000008506 I 0.773
TBX3 Gorilla gorilla ENSGGOG00000004238 I 0.773
ENSAMEG00000001090 Ailuropoda melanoleuca ENSAMEG00000001090 I 0.773
TBX3 Loxodonta africana ENSLAFG00000002948 I 0.773
ENSLACG00000006293 Latimeria chalumnae ENSLACG00000006293 I 0.773
TBX3 Bos taurus ENSBTAG00000021706 I 0.773
ENSECAG00000012861 Equus caballus ENSECAG00000012861 I 0.773
ENSCSAG00000002344 Chlorocebus sabaeus ENSCSAG00000002344 I 0.773
TBX3 Cavia porcellus ENSCPOG00000003952 I 0.773
TBX3 Callithrix jacchus ENSCJAG00000009716 I 0.773
TBX3 Canis familiaris ENSCAFG00000009216 I 0.773
TBX3 Dasypus novemcinctus ENSDNOG00000044358 I 0.773
TBX3 Monodelphis domestica ENSMODG00000012059 I 0.773
ENSLOCG00000007598 Lepisosteus oculatus ENSLOCG00000007598 I 0.773
ENSGALG00000008250 Gallus gallus ENSGALG00000008250 I 0.773
TBX3 Microcebus murinus ENSMICG00000010947 I 0.773
TBX3 Macaca mulatta ENSMMUG00000015070 I 0.773
ENSMGAG00000010084 Meleagris gallopavo ENSMGAG00000010084 I 0.773
TBX3 Myotis lucifugus ENSMLUG00000007567 I 0.773
ENSONIG00000001919 Oreochromis niloticus ENSONIG00000001919 I 0.772
DAPPUDRAFT_13272 Daphnia pulex DAPPUDRAFT_13272 I 0.771
EFV62265 Trichinella spiralis EFV62265 I 0.771
D917_09589 Trichinella nativa D917_09589 I 0.771
LotgiG117236 Lottia gigantea LotgiG117236 I 0.770
tbx2.S Xenopus laevis XB-GENE-6255176 I 0.769
AAI57537 Xenopus tropicalis AAI57537 I 0.769
CGI_10005914 Crassostrea gigas CGI_10005914 I 0.768
tbx2b Oryzias latipes ENSORLG00000010011 I 0.768
TsM_000101300 Taenia solium TsM_000101300 I 0.768
estExt_fgenesh2_pg.C_1570035 Branchiostoma floridae estExt_fgenesh2_pg.C_1570035 I 0.767
tbx3a Tetraodon nigroviridis ENSTNIG00000009035 I 0.767
ENSXMAG00000005372 Xiphophorus maculatus ENSXMAG00000005372 I 0.767
estExt_fgenesh2_pg.C_1570024 Branchiostoma floridae estExt_fgenesh2_pg.C_1570024 D 0.767
tbx3a Gasterosteus aculeatus ENSGACG00000016783 I 0.767
ENSAMXG00000009197 Astyanax mexicanus ENSAMXG00000009197 I 0.767
tbx3a Oryzias latipes ENSORLG00000007316 I 0.767
ENSGMOG00000011728 Gadus morhua ENSGMOG00000011728 I 0.767
tbx3a Danio rerio ENSDARG00000002216 I 0.767
ENSPFOG00000024759 Poecilia formosa ENSPFOG00000024759 I 0.767
tbx3a Takifugu rubripes ENSTRUG00000015097 I 0.767
ENSONIG00000000187 Oreochromis niloticus ENSONIG00000000187 I 0.767
NEMVEDRAFT_v1g102530 Nematostella vectensis NEMVEDRAFT_v1g102530 I 0.766
Hba_14542 Heterorhabditis bacteriophora Hba_14542 I 0.765
SPU_023386 Strongylocentrotus purpuratus SPU_023386 I 0.764
AAEL018223 Aedes aegypti AAEL018223 I 0.764
tbx3b Danio rerio ENSDARG00000061509 I 0.764
XP_008203914.1 Nasonia vitripennis XP_008203914.1 D 0.763
GB49684 Apis mellifera GB49684 I 0.763
CapteG152028 Capitella teleta CapteG152028 I 0.763
tbx5b Tetraodon nigroviridis ENSTNIG00000015908 I 0.762
ENSXMAG00000005715 Xiphophorus maculatus ENSXMAG00000005715 I 0.761
TBX2 Takifugu rubripes ENSTRUG00000008297 D 0.761
ENSPFOG00000016384 Poecilia formosa ENSPFOG00000016384 I 0.761
ENSGMOG00000002896 Gadus morhua ENSGMOG00000002896 I 0.761
TBX2 Gasterosteus aculeatus ENSGACG00000013575 D 0.761
TBX2 Oryzias latipes ENSORLG00000014792 I 0.761
ENSONIG00000010454 Oreochromis niloticus ENSONIG00000010454 I 0.761
SMU15026199 Schmidtea mediterranea SMU15026199 I 0.759
HelroG63904 Helobdella robusta HelroG63904 I 0.759
tbx2b Takifugu rubripes ENSTRUG00000009981 I 0.758
LotgiG117095 Lottia gigantea LotgiG117095 I 0.756
Ocbimv22029974m.g Octopus bimaculoides Ocbimv22029974m.g I 0.756
CGI_10016324 Crassostrea gigas CGI_10016324 I 0.755
ENSPFOG00000022507 Poecilia formosa ENSPFOG00000022507 I 0.753
tbx4 Oryzias latipes ENSORLG00000014806 I 0.753
ENSXMAG00000005717 Xiphophorus maculatus ENSXMAG00000005717 I 0.753
tbx2b Tetraodon nigroviridis ENSTNIG00000010765 I 0.752
TBX4 Meleagris gallopavo ENSMGAG00000007617 I 0.751
CGI_10016325 Crassostrea gigas CGI_10016325 I 0.750
LotgiG116991 Lottia gigantea LotgiG116991 I 0.749
tbx5b Danio rerio ENSDARG00000092060 I 0.748
Smp_145230 Schistosoma mansoni Smp_145230 I 0.748
TBX2 Tetraodon nigroviridis ENSTNIG00000014395 I 0.747
CapteG110717 Capitella teleta CapteG110717 I 0.747
EmuJ_001171900 Echinococcus multilocularis EmuJ_001171900 I 0.745
HNAJ_0001193901 Hymenolepis nana HNAJ_0001193901 I 0.745
ENSBTAP00000015125-D1 Bos grunniens ENSBTAP00000015125-D1 I 0.744
tbx5.L Xenopus laevis XB-GENE-865653 I 0.744
ENSP00000384152 Macaca fascicularis ENSP00000384152 I 0.744
TBX5 Callithrix jacchus ENSCJAG00000009744 I 0.744
tbx5 Xenopus tropicalis XB-GENE-486855 I 0.744
Cmyd_10018097 Chelonia mydas Cmyd_10018097 I 0.744
HmN_000174100 Hymenolepis microstoma HmN_000174100 N 0.744
ENSAMXG00000009196 Astyanax mexicanus ENSAMXG00000009196 I 0.744
TBX5 Bos taurus ENSBTAG00000011384 I 0.744
ENSAMEG00000001112 Ailuropoda melanoleuca ENSAMEG00000001112 I 0.744
TBX5 Canis familiaris ENSCAFG00000009189 I 0.744
Ogr05323 Ophisaurus gracilis Ogr05323 I 0.744
HNAJ_0001177601 Hymenolepis nana HNAJ_0001177601 N 0.744
Myotis_brandtii_TBX5_10028219 Myotis brandtii Myotis_brandtii_TBX5_10028219 I 0.744
TBX5 Dasypus novemcinctus ENSDNOG00000025303 I 0.744
ENSPANG00000016891 Papio anubis ENSPANG00000016891 I 0.744
tbx5a Oryzias latipes ENSORLG00000007339 I 0.744
TBX5 Loxodonta africana ENSLAFG00000010125 I 0.744
ENSPFOG00000019824 Poecilia formosa ENSPFOG00000019824 I 0.744
ENSPPYG00000004994 Pongo abelii ENSPPYG00000004994 I 0.744
Tbx5 Rattus norvegicus ENSRNOG00000001399 I 0.744
ENSGMOG00000011740 Gadus morhua ENSGMOG00000011740 I 0.744
ENSLACG00000002339 Latimeria chalumnae ENSLACG00000002339 I 0.744
TBX5 Otolemur garnettii ENSOGAG00000016204 I 0.744
ENSLOCG00000007616 Lepisosteus oculatus ENSLOCG00000007616 I 0.744
Tbx5 Mus musculus ENSMUSG00000018263 D 0.744
TBX5 Macaca mulatta ENSMMUG00000016202 I 0.744
ENSMPUG00000002715 Mustela putorius furo ENSMPUG00000002715 I 0.744
TBX5 Myotis lucifugus ENSMLUG00000016530 I 0.744
TBX5 Meleagris gallopavo ENSMGAG00000010075 I 0.744
TBX5 Oryctolagus cuniculus ENSOCUG00000012715 I 0.744
ENSOARG00000006614 Ovis aries ENSOARG00000006614 I 0.744
TBX5 Gorilla gorilla ENSGGOG00000013775 I 0.744
TBX5 Pan troglodytes ENSPTRG00000005496 I 0.744
TBX5 Equus caballus ENSECAG00000017114 I 0.744
TBX5 Cavia porcellus ENSCPOG00000014558 I 0.744
TBX5 Gallus gallus ENSGALG00000008253 I 0.744
tbx5a Danio rerio ENSDARG00000024894 I 0.744
Alligator_sinensis_CCG008096.1 Alligator sinensis Alligator_sinensis_CCG008096.1 I 0.744
ENSCSAG00000002347 Chlorocebus sabaeus ENSCSAG00000002347 I 0.744
ENSFALG00000007778 Ficedula albicollis ENSFALG00000007778 I 0.744
ENSXMAG00000005348 Xiphophorus maculatus ENSXMAG00000005348 I 0.744
TBX5 Tursiops truncatus ENSTTRG00000000980 I 0.744
TBX5 Homo sapiens ENSG00000089225 D 0.744
TBX5 Sus scrofa ENSSSCG00000009867 I 0.744
TBX5 Felis catus ENSFCAG00000005574 I 0.744
Sakowv30012255m.g Saccoglossus kowalevskii Sakowv30012255m.g I 0.741
ENSCSAVG00000009650 Ciona savignyi ENSCSAVG00000009650 I 0.740
ENSCING00000008678 Ciona intestinalis ENSCING00000008678 I 0.740
ENSAMXG00000007100 Astyanax mexicanus ENSAMXG00000007100 I 0.739
TBX5 Monodelphis domestica ENSMODG00000012045 I 0.739
Bm3498 Brugia malayi Bm3498 I 0.739
HelroG71638 Helobdella robusta HelroG71638 I 0.739
ASU_08095 Ascaris suum ASU_08095 I 0.739
Cmyd_10016207 Chelonia mydas Cmyd_10016207 I 0.738
WBGene00245873 Onchocerca volvulus WBGene00245873 I 0.736
LotgiG171118 Lottia gigantea LotgiG171118 I 0.735
SVE_1909900 Strongyloides venezuelensis SVE_1909900 I 0.734
SPAL_0001704100 Strongyloides papillosus SPAL_0001704100 I 0.734
SSTP_0000270400 Strongyloides stercoralis SSTP_0000270400 I 0.734
SCUD_0001668701 Schistosoma curassoni SCUD_0001668701 I 0.105
SMRZ_0000901601 Schistosoma margrebowiei SMRZ_0000901601 I 0.105