CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVUK_0002073301
(
Strongylus vulgaris
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
SVUK_0002073301
T341984_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVUK_0002073301-mRNA-1
T-box
1
37
MHHDGVMPGAHWMRQPVNFERVKITNNPNDTNPSHTR
Links
Other
T-box
family TFs
Other
Strongylus vulgaris
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCDUO_18602
Ancylostoma duodenale
ANCDUO_18602
N
0.828
TELCIR_16834
Teladorsagia circumcincta
TELCIR_16834
N
0.808
augustus_masked-nMf.1.1.scaf07901-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf07901-processed-gene-0.0
N
0.784
OESDEN_20448
Oesophagostomum dentatum
OESDEN_20448
N
0.771
ANCCEY_10148
Ancylostoma ceylanicum
ANCCEY_10148
N
0.770
ACEP21923
Atta cephalotes
ACEP21923
N
0.770
RPRC007267
Rhodnius prolixus
RPRC007267
N
0.764
SCUD_0002048801
Schistosoma curassoni
SCUD_0002048801
N
0.760
SROB_0000780601
Schistosoma rodhaini
SROB_0000780601
N
0.756
snap_masked-nMf.1.1.scaf23208-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf23208-processed-gene-0.2
N
0.756
Smp_101790
Schistosoma mansoni
Smp_101790
N
0.756
GPUH_0000570001
Gongylonema pulchrum
GPUH_0000570001
N
0.754
SMTD_0001831301
Schistosoma mattheei
SMTD_0001831301
N
0.737
BGIBMGA012897
Bombyx mori
BGIBMGA012897
N
0.736