CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
maker-pve_contig_833-fgenesh-gene-0.1
(
Pythium vexans
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00352 (TBP)
IPR000814
maker-pve_contig_833-fgenesh-gene-0.1
T342698_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPV00000022281
TBP
32
114
SVKIMNVVGTVDLKTPLELKTIALHARNAEYNPKRFSAVIMRLRDPKTTALIFGSGKIVITGGTSEESCRLAARKFTRVIQKL
EPrPV00000022281
TBP
122
205
EFKVRNVMGTCDIRFPIRLEGLLNDHARFASYEPELFPGLIYKLVEPKLTLLIFVSGKIVLCGARDTDHLHQAIDKMYPVLLQY
Links
Other
TBP
family TFs
Other
Pythium vexans
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_Genewise1Plus.C_30071
Phytophthora capsici
estExt_Genewise1Plus.C_30071
N
0.970
maker-piw_contig_412-fgenesh-gene-0.6
Pythium iwayamai
maker-piw_contig_412-fgenesh-gene-0.6
N
0.970
maker-pir_contig_920-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_920-fgenesh-gene-0.2
N
0.970
fgenesh_scip_prom.28083.3030
Phytophthora lateralis
fgenesh_scip_prom.28083.3030
N
0.964
F443_17719
Phytophthora parasitica
F443_17719
N
0.964
PITG_07312
Phytophthora infestans
PITG_07312
N
0.964
Physo111770
Phytophthora sojae
Physo111770
N
0.952
PYU1_G013989
Pythium ultimum
PYU1_G013989
N
0.940
Phyra44780
Phytophthora ramorum
Phyra44780
N
0.940
ALNC14_032430
Albugo laibachii
ALNC14_032430
N
0.802
HpaG813721
Hyaloperonospora arabidopsidis
HpaG813721
N
0.784
SPRG_03180
Saprolegnia parasitica
SPRG_03180
N
0.701