ORGLA06G0285000 (Oryza glaberrima)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 ORGLA06G0285000 T342775_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.847 0.847
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.847 0.847
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.847 0.847
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.802 0.802
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.802 0.802
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.802 0.802
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.802 0.802
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.802 0.802
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.802 0.802
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.802 0.802
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.802 0.802
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.802 0.802
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA06G0285000.1 TBP 1 27
ORGLA06G0285000.1 TBP 35 118

Links

Other TBP family TFs
Other Oryza glaberrima TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PDK_20s1328661g002 Phoenix dactylifera PDK_20s1328661g002 I 0.991
Pavir.J26398 Panicum virgatum Pavir.J26398 I 0.991
ORUFI03G29280 Oryza rufipogon ORUFI03G29280 I 0.982
BGIOSGA013244 Oryza indica BGIOSGA013244 I 0.982
Aquca_037_00296 Aquilegia coerulea Aquca_037_00296 I 0.982
OLONG_010453 Oryza longistaminata OLONG_010453 I 0.981
Pavir.Ib04166 Panicum virgatum Pavir.Ib04166 I 0.973
Sb08g022273 Sorghum bicolor Sb08g022273 I 0.973
Gorai.004G244700 Gossypium raimondii Gorai.004G244700 I 0.973
orange1.1g029591m.g Citrus sinensis orange1.1g029591m.g I 0.973
Traes_4AL_D48452758 Triticum aestivum Traes_4AL_D48452758 I 0.973
POPTR_0019s04890 Populus trichocarpa POPTR_0019s04890 I 0.964
GRMZM2G161418 Zea mays GRMZM2G161418 I 0.964
OPUNC01G04710 Oryza punctata OPUNC01G04710 I 0.963
SapurV1A.0308s0180 Salix purpurea SapurV1A.0308s0180 I 0.955
Traes_5BS_AD70A5AF7 Triticum aestivum Traes_5BS_AD70A5AF7 I 0.955
Traes_5AS_03EE89960 Triticum aestivum Traes_5AS_03EE89960 I 0.955
mgf009543m Mimulus guttatus mgf009543m I 0.955
MLOC_37365 Hordeum vulgare MLOC_37365 I 0.955
AMTR_s00047p00131170 Amborella trichopoda AMTR_s00047p00131170 I 0.947
MTR_4g029010 Medicago truncatula MTR_4g029010 I 0.946
Cagra.0001s0028 Capsella grandiflora Cagra.0001s0028 I 0.919
Bostr.6758s0027 Boechera stricta Bostr.6758s0027 I 0.919
Carubv10010337m.g Capsella rubella Carubv10010337m.g I 0.919
Bo6g051360 Brassica oleracea Bo6g051360 I 0.919
Bo3g185290 Brassica oleracea Bo3g185290 I 0.919
Bra030855 Brassica rapa Bra030855 I 0.919
Pavir.Ib03379 Panicum virgatum Pavir.Ib03379 I 0.910
TBP2 Arabidopsis lyrata fgenesh2_kg.1__4564__AT1G55520.2 I 0.910
Pavir.J18057 Panicum virgatum Pavir.J18057 I 0.901
Bostr.3640s0136 Boechera stricta Bostr.3640s0136 I 0.901
OMERI10G08240 Oryza meridionalis OMERI10G08240 I 0.892
ORUFI10G11330 Oryza rufipogon ORUFI10G11330 I 0.892
OS10G0432300 Oryza sativa OS10G0432300 I 0.892
ORGLA10G0095800 Oryza glaberrima ORGLA10G0095800 I 0.892
ONIVA01G08510 Oryza nivara ONIVA01G08510 I 0.892
BGIOSGA031868 Oryza indica BGIOSGA031868 I 0.892
SELMODRAFT_16705 Selaginella moellendorffii SELMODRAFT_16705 I 0.883
SELMODRAFT_37142 Selaginella moellendorffii SELMODRAFT_37142 I 0.883
GLOINDRAFT_79885 Rhizophagus irregularis GLOINDRAFT_79885 I 0.883
fgeneshPB_pg.12__294 Phycomyces blakesleeanus fgeneshPB_pg.12__294 I 0.883
e_gw1.11.241.1 Mucor circinelloides e_gw1.11.241.1 I 0.883
e_gw1.1.2234.1 Mucor circinelloides e_gw1.1.2234.1 I 0.883
OPUNC03G21560 Oryza punctata OPUNC03G21560 I 0.879
RO3G_16620 Rhizopus oryzae RO3G_16620 I 0.874
PredSwiss_EST785.1 Pneumocystis carinii PredSwiss_EST785.1 I 0.874
PredSwiss_ASS2010_1907.1 Pneumocystis carinii PredSwiss_ASS2010_1907.1 I 0.874
PNEG_00724 Pneumocystis murina PNEG_00724 I 0.874
SJAG_00421 Schizosaccharomyces japonicus SJAG_00421 I 0.874
Thhalv10022351m.g Eutrema salsugineum Thhalv10022351m.g I 0.865
CORT_0A11870 Candida orthopsilosis CORT_0A11870 I 0.856
e_gwh1.1.1.994.1 Pichia stipitis e_gwh1.1.1.994.1 I 0.856
PICST_38880 Scheffersomyces stipitis PICST_38880 I 0.856
LELG_01062 Lodderomyces elongisporus LELG_01062 I 0.856
DI09_319p10 Microsporidia sp DI09_319p10 I 0.856
CPAG_04505 Candida parapsilosis CPAG_04505 I 0.856
SPAPADRAFT_58486 Spathaspora passalidarum SPAPADRAFT_58486 I 0.856
Si023295m.g Setaria italica Si023295m.g I 0.850
SU7_0942 Saccharomyces arboricola SU7_0942 I 0.847
tbp1 Schizosaccharomyces pombe SPAC29E6.08 I 0.847
SOCG_04191 Schizosaccharomyces octosporus SOCG_04191 I 0.847
SKUD_163604 Saccharomyces kudriavzevii SKUD_163604 I 0.847
SPOG_00351 Schizosaccharomyces cryophilus SPOG_00351 I 0.847
HCBG_06828 Histoplasma capsulatum HCBG_06828 I 0.838
MVLG_00350 Microbotryum violaceum MVLG_00350 I 0.838
DACRYDRAFT_75233 Dacryopinax sp DACRYDRAFT_75233 I 0.838
H105_07693 Trichophyton soudanense H105_07693 I 0.838
CPC735_006990 Coccidioides posadasii CPC735_006990 I 0.838
PV04_08198 Capronia semiimmersa PV04_08198 I 0.838
CIMG_11148 Coccidioides immitis CIMG_11148 I 0.838
MGYG_01238 Microsporum gypseum MGYG_01238 I 0.838
H102_07668 Trichophyton rubrum H102_07668 I 0.838
H101_08207 Trichophyton interdigitale H101_08207 I 0.838
Aquca_013_00902 Aquilegia coerulea Aquca_013_00902 I 0.838
MCYG_00725 Arthroderma otae MCYG_00725 I 0.838
SPBR_07999 Sporothrix brasiliensis SPBR_07999 I 0.838
TESG_08364 Trichophyton tonsurans TESG_08364 I 0.838
PIIN_00750 Piriformospora indica PIIN_00750 I 0.829
estExt_fgenesh3_kg.C_20416 Heterobasidion annosum estExt_fgenesh3_kg.C_20416 I 0.829
SCLCIDRAFT_144717 Scleroderma citrinum SCLCIDRAFT_144717 I 0.829
gwh2.1.1035.1 Phanerochaete chrysosporium gwh2.1.1035.1 I 0.829
SERLA73DRAFT_76226 Serpula lacrymans SERLA73DRAFT_76226 I 0.829
UCREL1_11678 Eutypa lata UCREL1_11678 I 0.829
TRV_02367 Trichophyton verrucosum TRV_02367 I 0.829
RHTO_08020 Rhodosporidium toruloides RHTO_08020 I 0.829
PISMIDRAFT_684343 Pisolithus microcarpus PISMIDRAFT_684343 I 0.829
PV09_01314 Verruconis gallopava PV09_01314 I 0.829
Lus10031531.g Linum usitatissimum Lus10031531.g I 0.829
PILCRDRAFT_51869 Piloderma croceum PILCRDRAFT_51869 I 0.829
PHLGIDRAFT_111859 Phlebiopsis gigantea PHLGIDRAFT_111859 I 0.829
FOMPIDRAFT_1017649 Fomitopsis pinicola FOMPIDRAFT_1017649 I 0.829
FIBRA_07233 Fibroporia radiculosa FIBRA_07233 I 0.829
GALMADRAFT_264138 Galerina marginata GALMADRAFT_264138 I 0.829
GRMZM2G149238 Zea mays GRMZM2G149238 I 0.829
HETIRDRAFT_242765 Heterobasidion irregulare HETIRDRAFT_242765 I 0.829
Moror_8271 Moniliophthora roreri Moror_8271 I 0.829
M378DRAFT_176716 Amanita muscaria M378DRAFT_176716 I 0.829
BN946_scf185000.g31 Trametes cinnabarina BN946_scf185000.g31 I 0.829
PDE_04702 Penicillium oxalicum PDE_04702 I 0.829
PHACADRAFT_256913 Phanerochaete carnosa PHACADRAFT_256913 I 0.829
A1Q1_08290 Trichosporon asahii A1Q1_08290 I 0.829
AGABI2DRAFT_44722 Agaricus bisporus AGABI2DRAFT_44722 I 0.829
BDDG_03170 Blastomyces dermatitidis BDDG_03170 I 0.829
J056_000874 Wallemia ichthyophaga J056_000874 I 0.820
WALSEDRAFT_33220 Wallemia sebi WALSEDRAFT_33220 I 0.820
Z517_03367 Fonsecaea pedrosoi Z517_03367 I 0.820
PV07_11953 Cladophialophora immunda PV07_11953 I 0.820
PV10_01351 Exophiala mesophila PV10_01351 I 0.820
PV06_02313 Exophiala oligosperma PV06_02313 I 0.820
PV11_06323 Exophiala sideris PV11_06323 I 0.820
PV05_09095 Exophiala xenobiotica PV05_09095 I 0.820
Aquca_124_00015 Aquilegia coerulea Aquca_124_00015 I 0.811
Cflo_04179--XP_623088.1_APIME Camponotus floridanus Cflo_04179--XP_623088.1_APIME I 0.811
THOM_0429 Trachipleistophora hominis THOM_0429 I 0.811
VCUG_02118 Vavraia culicis VCUG_02118 I 0.811
GB47180 Apis mellifera GB47180 I 0.811
PHUM533080 Pediculus humanus PHUM533080 I 0.811
HMEL016424 Heliconius melpomene HMEL016424 I 0.811
ACEP14716 Atta cephalotes ACEP14716 I 0.811
Bo2g007300 Brassica oleracea Bo2g007300 I 0.811
LotgiG129673 Lottia gigantea LotgiG129673 I 0.811
KGM_04261 Danaus plexippus KGM_04261 I 0.811
MCINX007129 Melitaea cinxia MCINX007129 I 0.811
CMQ_1115 Grosmannia clavigera CMQ_1115 I 0.811
AB04989.1 Alternaria brassicicola AB04989.1 I 0.802
Bra028725 Brassica rapa Bra028725 I 0.802
TriadG50358 Trichoplax adhaerens TriadG50358 I 0.802
Gorai.013G202900 Gossypium raimondii Gorai.013G202900 I 0.802
HHAL004028-PA Halyomorpha halys HHAL004028-PA I 0.802
ENSPMAG00000006175 Petromyzon marinus ENSPMAG00000006175 I 0.802
Ciclev10022324m.g Citrus clementina Ciclev10022324m.g I 0.800
NAPIS_ORF00497 Nosema apis NAPIS_ORF00497 I 0.793
DAPPUDRAFT_194512 Daphnia pulex DAPPUDRAFT_194512 I 0.793
K437DRAFT_258899 Tilletiaria anomala K437DRAFT_258899 I 0.793
SPBR_06113 Sporothrix brasiliensis SPBR_06113 I 0.793
NAPIS_ORF01258 Nosema apis NAPIS_ORF01258 I 0.793
TC008403 Tribolium castaneum TC008403 I 0.793
chr1.LjT45A19.110.nd Lotus japonicus chr1.LjT45A19.110.nd I 0.785
tbp Oryzias latipes ENSORLG00000010757 I 0.784
GI18943 Drosophila mojavensis FBgn0141682 I 0.784
Sb01g017130 Sorghum bicolor Sb01g017130 I 0.784
TBPL2 Gallus gallus ENSGALG00000012145 I 0.784
TBPL2 Meleagris gallopavo ENSMGAG00000013657 I 0.784
SMU15013179 Schmidtea mediterranea SMU15013179 I 0.784
ENSAPLG00000006951 Anas platyrhynchos ENSAPLG00000006951 I 0.784
OLONG_006902 Oryza longistaminata OLONG_006902 I 0.780
trf3 Takifugu rubripes ENSTRUG00000009283 I 0.775
tbpl2.L Xenopus laevis XB-GENE-876147 I 0.775
TBPL2 Microcebus murinus ENSMICG00000000943 I 0.775
tbpl2 Tetraodon nigroviridis ENSTNIG00000002597 I 0.775
CHLREDRAFT_144556 Chlamydomonas reinhardtii CHLREDRAFT_144556 I 0.775
Aqu1.225918 Amphimedon queenslandica Aqu1.225918 I 0.766
TBPL2 Canis familiaris ENSCAFG00000015052 I 0.766
H311_04080 Anncaliia algerae H311_04080 I 0.766
ATG14 Dasypus novemcinctus ENSDNOG00000015108 I 0.766
mgf012063m Mimulus guttatus mgf012063m I 0.763
PDK_20s1536561g001 Phoenix dactylifera PDK_20s1536561g001 I 0.761
ML03273a Mnemiopsis leidyi ML03273a I 0.757
e_gw1.11.176.1 Naegleria gruberi e_gw1.11.176.1 I 0.757
MTR_3g065900 Medicago truncatula MTR_3g065900 N 0.757
LjSGA_031793.1 Lotus japonicus LjSGA_031793.1 I 0.748
Tal_R008176 Tyto alba Tal_R008176 I 0.748
ENSOARG00000015944 Ovis aries ENSOARG00000015944 I 0.748
ENSECAG00000008702 Equus caballus ENSECAG00000008702 I 0.748
TBPL2 Cavia porcellus ENSCPOG00000006151 I 0.748
MTR_3g066070 Medicago truncatula MTR_3g066070 N 0.739
HmN_000119900 Hymenolepis microstoma HmN_000119900 I 0.730
HNAJ_0000219201 Hymenolepis nana HNAJ_0000219201 I 0.730
RSKR_0000436900 Rhabditophanes kr3021 RSKR_0000436900 I 0.730
Ca_19794 Cicer arietinum Ca_19794 N 0.728
SNAPOd2T00004230001 Oikopleura dioica SNAPOd2T00004230001 I 0.727
EURHEDRAFT_409588 Aspergillus ruber EURHEDRAFT_409588 I 0.724
M404DRAFT_1000909 Pisolithus tinctorius M404DRAFT_1000909 I 0.724
M413DRAFT_438675 Hebeloma cylindrosporum M413DRAFT_438675 I 0.724
M438DRAFT_342525 Aureobasidium pullulans M438DRAFT_342525 I 0.724
M408DRAFT_329006 Serendipita vermifera M408DRAFT_329006 I 0.717
TriadG22173 Trichoplax adhaerens TriadG22173 I 0.712
PPA00840 Pristionchus pacificus PPA00840 I 0.703
GRMZM2G466938 Zea mays GRMZM2G466938 I 0.703