HPBE_0000236501 (Heligmosomoides bakeri)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 HPBE_0000236501 T343496_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.714 0.714
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.714 0.714
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.714 0.714
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.714 0.714
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.714 0.714
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.714 0.714
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.714 0.714
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.714 0.714
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.714 0.714
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0000236501-mRNA-1 TBP 1 43
HPBE_0000236501-mRNA-1 TBP 51 134

Links

Other TBP family TFs
Other Heligmosomoides bakeri TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NECAME_12365 Necator americanus NECAME_12365 I 0.937
HPLM_0001046201 Haemonchus placei HPLM_0001046201 I 0.929
ANCCEY_00955 Ancylostoma ceylanicum ANCCEY_00955 I 0.929
ANCDUO_08400 Ancylostoma duodenale ANCDUO_08400 I 0.929
ANCCAN_00844 Ancylostoma caninum ANCCAN_00844 I 0.929
OESDEN_10436 Oesophagostomum dentatum OESDEN_10436 N 0.905
ACOC_0000447501 Angiostrongylus costaricensis ACOC_0000447501 I 0.841
ANCDUO_13676 Ancylostoma duodenale ANCDUO_13676 I 0.794
D917_07868 Trichinella nativa D917_07868 I 0.786
PPA00840 Pristionchus pacificus PPA00840 I 0.786
DME_0000305201 Dracunculus medinensis DME_0000305201 I 0.786
EFV53163 Trichinella spiralis EFV53163 I 0.786
CJA15284 Caenorhabditis japonica CJA15284 I 0.786
CBG09138 Caenorhabditis briggsae CBG09138 I 0.786
CRE07760 Caenorhabditis remanei CRE07760 I 0.786
CBN01059 Caenorhabditis brenneri CBN01059 I 0.786
D918_02710 Trichuris suis D918_02710 I 0.770
RSKR_0000436900 Rhabditophanes kr3021 RSKR_0000436900 I 0.770
L596_g25394 Steinernema carpocapsae L596_g25394 I 0.770
NBR_0001088401 Nippostrongylus brasiliensis NBR_0001088401 I 0.766
L898_g32593 Steinernema monticolum L898_g32593 I 0.762
L889_g25192 Steinernema feltiae L889_g25192 I 0.762
ENSOANG00000022637 Ornithorhynchus anatinus ENSOANG00000022637 I 0.741
TBPL2 Microcebus murinus ENSMICG00000000943 I 0.738
TBPL2 Gallus gallus ENSGALG00000012145 I 0.738
ATG14 Dasypus novemcinctus ENSDNOG00000015108 I 0.738
TBPL2 Meleagris gallopavo ENSMGAG00000013657 I 0.738
DAPPUDRAFT_194512 Daphnia pulex DAPPUDRAFT_194512 I 0.730
HHAL004028-PA Halyomorpha halys HHAL004028-PA I 0.730
TBPL2 Canis familiaris ENSCAFG00000015052 I 0.730
Pvit_04001 Pogona vitticeps Pvit_04001 I 0.730
tbpl2.L Xenopus laevis XB-GENE-876147 I 0.730
ENSLACG00000019034 Latimeria chalumnae ENSLACG00000019034 I 0.730
ENSECAG00000008702 Equus caballus ENSECAG00000008702 I 0.730
SINV24483 Solenopsis invicta SINV24483 I 0.722
Cflo_04179--XP_623088.1_APIME Camponotus floridanus Cflo_04179--XP_623088.1_APIME I 0.722
Hsal_00478--XP_623088.1_APIME Harpegnathos saltator Hsal_00478--XP_623088.1_APIME I 0.722
OESDEN_24315 Oesophagostomum dentatum OESDEN_24315 N 0.722
ENSBTAP00000024325-D1 Bos grunniens ENSBTAP00000024325-D1 I 0.722
KGM_04261 Danaus plexippus KGM_04261 I 0.722
PHUM533080 Pediculus humanus PHUM533080 I 0.722
trf3 Takifugu rubripes ENSTRUG00000009283 I 0.722
TBPL2 Tursiops truncatus ENSTTRG00000002034 I 0.722
ENSPMAG00000006175 Petromyzon marinus ENSPMAG00000006175 I 0.722
ENSOARG00000021094 Ovis aries ENSOARG00000021094 I 0.722
ENSAPLG00000006951 Anas platyrhynchos ENSAPLG00000006951 I 0.722
TBPL2 Bos taurus ENSBTAG00000018277 I 0.722
TBPL2 Cavia porcellus ENSCPOG00000006151 I 0.722
GB47180 Apis mellifera GB47180 I 0.722
tbpl2 Tetraodon nigroviridis ENSTNIG00000002597 I 0.722
MCINX007129 Melitaea cinxia MCINX007129 I 0.722
L798_11200 Zootermopsis nevadensis L798_11200 I 0.722
ACEP14716 Atta cephalotes ACEP14716 I 0.722
HMEL016424 Heliconius melpomene HMEL016424 I 0.722
tbp Danio rerio ENSDARG00000014994 I 0.714
Tbpl2 Dipodomys ordii ENSDORG00000003307 I 0.714
tbp Gasterosteus aculeatus ENSGACG00000016147 I 0.714
ENSCSAVG00000007153 Ciona savignyi ENSCSAVG00000007153 I 0.714
CapteG209597 Capitella teleta CapteG209597 I 0.714
TBPL2 Callithrix jacchus ENSCJAG00000018372 I 0.714
ENSGMOG00000012435 Gadus morhua ENSGMOG00000012435 I 0.714
ENSAMXG00000003582 Astyanax mexicanus ENSAMXG00000003582 I 0.714
TC008403 Tribolium castaneum TC008403 I 0.714
Tal_R008176 Tyto alba Tal_R008176 I 0.714
LLOJ006615 Lutzomyia longipalpis LLOJ006615 I 0.714
ENSONIG00000017061 Oreochromis niloticus ENSONIG00000017061 I 0.714
PPAI004956 Phlebotomus papatasi PPAI004956 I 0.714
GI18943 Drosophila mojavensis FBgn0141682 I 0.706
T265_13707 Opisthorchis viverrini T265_13707 I 0.706
csin110354 Clonorchis sinensis csin110354 I 0.706
PTTG_01229 Puccinia triticina PTTG_01229 I 0.706
TBPL2 Otolemur garnettii ENSOGAG00000030735 I 0.706
PTTG_06059 Puccinia triticina PTTG_06059 I 0.706
TriadG50358 Trichoplax adhaerens TriadG50358 I 0.706