GSMUA_Achr11G17370_001 (Musa acuminata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GSMUA_Achr11G17370_001 T343955_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TCP20
M02502_2.00
Arabidopsis thaliana
GGSCCCACNN

NNGTGGGSCC
PBM
Weirauch et al.(2014)
pTH8159
0.944 0.603
TCP20
M07285_2.00
Arabidopsis thaliana
NNNNNNNNNNGTGGGRCCCAC

GTGGGYCCCACNNNNNNNNNN
Dap-seq
OMalley et al.(2016)
TCP20_col_a
0.944 0.603
TCP20
M07286_2.00
Arabidopsis thaliana
RTGGGDCCCACH

DGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
TCP20_colamp_a
0.944 0.603
TCP20
M11397_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP20_01
0.944 0.603
AT-TCP20
M02507_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9229
0.942 0.603
PCF2
M11399_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF2_01
0.942 0.750
TCP19
M02504_2.00
Arabidopsis thaliana
NNGGVCCCAC

GTGGGBCCNN
PBM
Weirauch et al.(2014)
pTH7452
0.942 0.779
LjSGA_053525.1
M02518_2.00
Lotus japonicus
GGNCCCAC

GTGGGNCC
PBM
Weirauch et al.(2014)
pTH9201
0.940 0.765
PK14653.1
M01317_2.00
Cannabis sativa
BGGSCCCAC

GTGGGSCCV
PBM
Lambert et al.(2019)
pTH11324
0.934 0.824
PK14653.1
M02517_2.00
Cannabis sativa
BTGGGCCCAV

BTGGGCCCAV
PBM
Weirauch et al.(2014)
pTH9586
0.934 0.824
VIT_15s0048g01150
M02515_2.00
Vitis vinifera
NNGGNCCCAC

GTGGGNCCNN
PBM
Weirauch et al.(2014)
pTH9294
0.927 0.809
cassava45561.m1
M02516_2.00
Manihot esculenta
KGGVCCCACH

DGTGGGBCCM
PBM
Weirauch et al.(2014)
pTH9207
0.927 0.603
fgenesh2_kg.8__1074__AT5G51910.2
M02509_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9232
0.925 0.794
PK13314.1
M01316_2.00
Cannabis sativa
NNGGNCCCAC

GTGGGNCCNN
PBM
Lambert et al.(2019)
pTH11330
0.925 0.632
TCP9
M01086_2.00
Arabidopsis thaliana
NNGGGCCCACN

NGTGGGCCCNN
PBM
Sullivan et al.(2014)
pTH9796
0.925 0.779
TCP9
M07281_2.00
Arabidopsis thaliana
RTGGGDCCCAC

GTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At2g45680_colamp_a
0.925 0.779
TCP9
M07282_2.00
Arabidopsis thaliana
DGTGGGRCCCACDDNDNDNBN

NVNHNHNHHGTGGGYCCCACH
Dap-seq
OMalley et al.(2016)
At2g45680_col_b
0.925 0.779
GLYMA19G26560
M02511_2.00
Glycine max
BGGBCCCAC

GTGGGVCCV
PBM
Weirauch et al.(2014)
pTH9184
0.924 0.632
TCP8
M01311_2.00
Arabidopsis thaliana
NGGNMCCAC

GTGGKNCCN
PBM
Lambert et al.(2019)
pTH11569
0.909 0.618
TCP15
M00892_2.00
Arabidopsis thaliana
NNGGNCCCAC

GTGGGNCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP15
0.907 0.603
PK12736.1
M01315_2.00
Cannabis sativa
NRRSCMYAYNNNNN

NNNNNRTRKGSYYN
PBM
Lambert et al.(2019)
pTH10121
0.907 0.603
TCP15
M07277_2.00
Arabidopsis thaliana
RTRGGDCCCACHH

DDGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_col_a
0.907 0.603
TCP15
M07278_2.00
Arabidopsis thaliana
RTRGGNCCCACHW

WDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a
0.907 0.603
TCP14
M07289_2.00
Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC

GTGGGHCCCACVHBMTHTBT
Dap-seq
OMalley et al.(2016)
TCP14_col_b
0.907 0.603
TCP15
M11394_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP15_01
0.907 0.603
TCP23
M00891_2.00
Arabidopsis thaliana
NNGGKCCCAC

GTGGGMCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP23
0.906 0.588
TCP22
M07279_2.00
Arabidopsis thaliana
RTRGGNCCCACHN

NDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a
0.903 0.588
TCP22
M07280_2.00
Arabidopsis thaliana
RTGGGDCCCACNN

NNGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At1g72010_col
0.903 0.588
TCP7
M07294_2.00
Arabidopsis thaliana
RTGGGNCCCAC

GTGGGNCCCAY
Dap-seq
OMalley et al.(2016)
TCP7_col_a
0.896 0.574
OsI_08196
M02513_2.00
Oryza sativa
GGGCCCAC

GTGGGCCC
PBM
Weirauch et al.(2014)
pTH9274
0.896 0.559
TCP21
M07292_2.00
Arabidopsis thaliana
NNRTGGGDCCCACN

NGTGGGHCCCAYNN
Dap-seq
OMalley et al.(2016)
At5g08330_col_a
0.896 0.559
TCP21
M07293_2.00
Arabidopsis thaliana
RTRGGDCCCACH

DGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At5g08330_colamp_a
0.896 0.559
OS02G0635800
M02512_2.00
Oryza sativa
NBGGGCCCVN

NBGGGCCCVN
PBM
Weirauch et al.(2014)
pTH8856
0.896 0.559
TCP11
M11395_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_01
0.831 0.485
TCP11
M11396_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_02
0.831 0.485
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr11P17370_001 TCP 1 106

Links

Other TCP family TFs
Other Musa acuminata TFs

648 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NCU04663 Neurospora crassa NCU04663 D 0.000
PITC_041810 Penicillium italicum PITC_041810 I 0.000
PFICI_07122 Pestalotiopsis fici PFICI_07122 I 0.000
PEX1_083360 Penicillium expansum PEX1_083360 I 0.000
PDIP_85460 Penicillium digitatum PDIP_85460 I 0.000
PDE_04102 Penicillium oxalicum PDE_04102 I 0.000
PABG_04642 Paracoccidioides brasiliensis PABG_04642 I 0.000
PAAG_08490 Paracoccidioides sp lutzii PAAG_08490 I 0.000
OIDMADRAFT_112327 Oidiodendron maius OIDMADRAFT_112327 I 0.000
NechaG40581 Fusarium solani NechaG40581 I 0.000
MGYG_00861 Microsporum gypseum MGYG_00861 I 0.000
MGU_05623 Metarhizium guizhouense MGU_05623 I 0.000
MGG_09263 Magnaporthe oryzae MGG_09263 I 0.000
MCYG_00297 Arthroderma otae MCYG_00297 I 0.000
MBR_04335 Metarhizium brunneum MBR_04335 I 0.000
MBM_05016 Marssonina brunnea MBM_05016 I 0.000
MAM_05041 Metarhizium album MAM_05041 I 0.000
MAJ_05180 Metarhizium majus MAJ_05180 I 0.000
PMAA_070340 Talaromyces marneffei PMAA_070340 I 0.000
PV07_06437 Cladophialophora immunda PV07_06437 I 0.000
estExt_fgenesh3_pm.C_140174 Neurospora discreta estExt_fgenesh3_pm.C_140174 I 0.000
e_gw1.5.1042.1 Nectria haematococca e_gw1.5.1042.1 I 0.000
VHEMI00437 Torrubiella hemipterigena VHEMI00437 I 0.000
UV8b_4097 Ustilaginoidea virens UV8b_4097 I 0.000
U727_0043004001 Penicillium solitum U727_0043004001 I 0.000
TSTA_090670 Talaromyces stipitatus TSTA_090670 I 0.000
TRIVIDRAFT_122714 Trichoderma virens TRIVIDRAFT_122714 I 0.000
TRIREDRAFT_49372 Trichoderma reesei TRIREDRAFT_49372 I 0.000
TRIATDRAFT_161814 Trichoderma atroviride TRIATDRAFT_161814 I 0.000
THITE_40970 Thielavia terrestris THITE_40970 I 0.000
TESG_02247 Trichophyton tonsurans TESG_02247 I 0.000
TEQG_02692 Trichophyton equinum TEQG_02692 I 0.000
SS1G_05371 Sclerotinia sclerotiorum SS1G_05371 I 0.000
SMAC_08342 Sordaria macrospora SMAC_08342 I 0.000
SBOR_3621 Sclerotinia borealis SBOR_3621 I 0.000
S40288_07421 Stachybotrys chartarum S40288_07421 I 0.000
PVAR5_8925 Byssochlamys spectabilis PVAR5_8925 I 0.000
MAC_03900 Metarhizium acridum MAC_03900 I 0.000
Bcin09g02560 Botrytis cinerea Bcin09g02560 I 0.000
Cob_02185 Colletotrichum orbiculare Cob_02185 I 0.000
CHGG_00505 Chaetomium globosum CHGG_00505 I 0.000
NFIA_024310 Neosartorya fischeri CADNFIAG00002261 I 0.000
CADAORAG00005589 Aspergillus oryzae CADAORAG00005589 I 0.000
BGHDH14_bgh01821 Blumeria graminis BGHDH14_bgh01821 I 0.000
ANIA_05849 Aspergillus nidulans CADANIAG00007192 I 0.000
AFUA_2G08040 Aspergillus fumigatus CADAFUAG00004446 I 0.000
ACLA_079920 Aspergillus clavatus CADACLAG00007683 I 0.000
BDDG_04796 Blastomyces dermatitidis BDDG_04796 I 0.000
PMAA_070340 Penicillium marneffei PMAA_070340 I 0.000
BBA_08191 Beauveria bassiana BBA_08191 I 0.000
ACRE_088710 Acremonium chrysogenum ACRE_088710 I 0.000
A1O9_13001 Exophiala aquamarina A1O9_13001 I 0.000
A1O9_03542 Exophiala aquamarina A1O9_03542 I 0.000
A1O3_03291 Capronia epimyces A1O3_03291 I 0.000
MCYG_00297 Microsporum canis MCYG_00297 I 0.000
CPUR_01702 Claviceps purpurea CPUR_01702 I 0.000
DRE_04286 Drechslerella stenobrocha DRE_04286 I 0.000
FOXG_05408 Fusarium oxysporum FOXG_05408 I 0.000
FOXG_14277 Fusarium oxysporum FOXG_14277 I 0.000
FPSE_00499 Fusarium pseudograminearum FPSE_00499 I 0.000
FVEG_02723 Fusarium verticillioides FVEG_02723 I 0.000
GSTUM_00005598001 Tuber melanosporum GSTUM_00005598001 I 0.000
H072_8333 Dactylellina haptotyla H072_8333 I 0.000
H101_07435 Trichophyton interdigitale H101_07435 I 0.000
HCBG_04625 Histoplasma capsulatum HCBG_04625 I 0.000
EV44_g6283 Erysiphe necator EV44_g6283 I 0.000
FGRRES_17309 Fusarium graminearum FGRRES_17309 I 0.000
FFUJ_07449 Fusarium fujikuroi FFUJ_07449 I 0.000
EURHEDRAFT_513914 Aspergillus ruber EURHEDRAFT_513914 I 0.000
CADANGAG00007493 Aspergillus niger CADANGAG00007493 N 0.000
PCH_Pc24g00780 Penicillium rubens PCH_Pc24g00780 N 0.000
Z517_10110 Fonsecaea pedrosoi Z517_10110 N 0.000
Z519_00024 Cladophialophora bantiana Z519_00024 N 0.000
A1O1_08282 Capronia coronata A1O1_08282 N 0.000
PCH_Pc24g01310 Penicillium rubens PCH_Pc24g01310 N 0.000
CPC735_054240 Coccidioides posadasii CPC735_054240 N 0.000
Pc22g26430 Penicillium chrysogenum Pc22g26430 N 0.000
Pc24g00780 Penicillium chrysogenum Pc24g00780 N 0.000
Pc24g01310 Penicillium chrysogenum Pc24g01310 N 0.000
A1O5_00025 Cladophialophora psammophila A1O5_00025 N 0.000
CIMG_00917 Coccidioides immitis CIMG_00917 N 0.000
A1O7_03671 Cladophialophora yegresii A1O7_03671 N 0.000
PV11_00815 Exophiala sideris PV11_00815 N 0.000
HMPREF1120_05352 Exophiala dermatitidis HMPREF1120_05352 N 0.000
PV10_05308 Exophiala mesophila PV10_05308 N 0.000
PV08_04106 Exophiala spinifera PV08_04106 N 0.000
PV06_00266 Exophiala oligosperma PV06_00266 N 0.000
AOL_s00083g362 Arthrobotrys oligospora AOL_s00083g362 N 0.000
G647_04707 Cladophialophora carrionii G647_04707 N 0.000
PV04_03866 Capronia semiimmersa PV04_03866 N 0.000
PCH_Pc22g26430 Penicillium rubens PCH_Pc22g26430 N 0.000
UREG_00865 Uncinocarpus reesii UREG_00865 N 0.000