CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold_501359.1
(
Arabidopsis lyrata
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
scaffold_501359.1
T344365_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_501359.1
TCP
11
217
ERKERRIPTSSKDRSNRIRLPVSCASQIFQLTQELGFKTDGETVGWLLRNAEPAIFAATGHSVNTTSNETSNEFIHSYMNMGNHNNYHFTDTSGVVYHNNYNVTIDNSIHYADTSGVVSHQRENITGHHGLVFPTAAMTEYGPSTSFPAKDMRENGHLMVNHNSRPVMLRPSMPQQQPQPQPLFDEFNKVEMGNSKQAMSPHKTNDR
Links
Other
TCP
family TFs
Other
Arabidopsis lyrata
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10018123m.g
Capsella rubella
Carubv10018123m.g
N
0.928
Cagra.24093s0001
Capsella grandiflora
Cagra.24093s0001
N
0.846
Cagra.3756s0013
Capsella grandiflora
Cagra.3756s0013
N
0.842
Carubv10019214m.g
Capsella rubella
Carubv10019214m.g
N
0.834