CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.24093s0001
(
Capsella grandiflora
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
Cagra.24093s0001
T344736_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.24093s0001.1.p
TCP
7
182
TECKARRTPTSSKDRHRRIRLPVTCAAQVFQLTQELCFKTDGETVGWLLRNAEPAILAATGHGLDTTSDETSNHFIHSYMNIHNCSNISFGNSYNYSCTIDNSVHYADTSGLVSHRRENITGHHGMVFPGATMPEYGPSTGFSENLMVNHNRPGMVRPSAPQPQPQQQPDDFDEVE
Links
Other
TCP
family TFs
Other
Capsella grandiflora
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.3756s0013
Capsella grandiflora
Cagra.3756s0013
N
0.954
Carubv10019214m.g
Capsella rubella
Carubv10019214m.g
N
0.937
Carubv10018123m.g
Capsella rubella
Carubv10018123m.g
N
0.901
scaffold_501359.1
Arabidopsis lyrata
scaffold_501359.1
N
0.846