Si026501m.g (Setaria italica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Si026501m.g T344390_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TCP8
M01311_2.00
Arabidopsis thaliana
NGGNMCCAC

GTGGKNCCN
PBM
Lambert et al.(2019)
pTH11569
0.962 0.600
TCP15
M00892_2.00
Arabidopsis thaliana
NNGGNCCCAC

GTGGGNCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP15
0.961 0.480
TCP15
M07277_2.00
Arabidopsis thaliana
RTRGGDCCCACHH

DDGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_col_a
0.961 0.480
TCP15
M07278_2.00
Arabidopsis thaliana
RTRGGNCCCACHW

WDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a
0.961 0.480
TCP15
M11394_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP15_01
0.961 0.480
TCP14
M07289_2.00
Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC

GTGGGHCCCACVHBMTHTBT
Dap-seq
OMalley et al.(2016)
TCP14_col_b
0.960 0.480
PK12736.1
M01315_2.00
Cannabis sativa
NRRSCMYAYNNNNN

NNNNNRTRKGSYYN
PBM
Lambert et al.(2019)
pTH10121
0.957 0.480
TCP22
M07279_2.00
Arabidopsis thaliana
RTRGGNCCCACHN

NDGTGGGNCCYAY
Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a
0.955 0.460
TCP22
M07280_2.00
Arabidopsis thaliana
RTGGGDCCCACNN

NNGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At1g72010_col
0.955 0.460
TCP23
M00891_2.00
Arabidopsis thaliana
NNGGKCCCAC

GTGGGMCCNN
PBM
Franco-Zorrilla et al.(2014)
TCP23
0.955 0.507
fgenesh2_kg.8__1074__AT5G51910.2
M02509_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9232
0.953 0.400
VIT_15s0048g01150
M02515_2.00
Vitis vinifera
NNGGNCCCAC

GTGGGNCCNN
PBM
Weirauch et al.(2014)
pTH9294
0.947 0.387
TCP19
M02504_2.00
Arabidopsis thaliana
NNGGVCCCAC

GTGGGBCCNN
PBM
Weirauch et al.(2014)
pTH7452
0.945 0.387
TCP9
M01086_2.00
Arabidopsis thaliana
NNGGGCCCACN

NGTGGGCCCNN
PBM
Sullivan et al.(2014)
pTH9796
0.945 0.400
TCP9
M07281_2.00
Arabidopsis thaliana
RTGGGDCCCAC

GTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
At2g45680_colamp_a
0.945 0.400
TCP9
M07282_2.00
Arabidopsis thaliana
DGTGGGRCCCACDDNDNDNBN

NVNHNHNHHGTGGGYCCCACH
Dap-seq
OMalley et al.(2016)
At2g45680_col_b
0.945 0.400
PK13314.1
M01316_2.00
Cannabis sativa
NNGGNCCCAC

GTGGGNCCNN
PBM
Lambert et al.(2019)
pTH11330
0.945 0.467
GLYMA19G26560
M02511_2.00
Glycine max
BGGBCCCAC

GTGGGVCCV
PBM
Weirauch et al.(2014)
pTH9184
0.944 0.433
PCF2
M11399_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF2_01
0.944 0.393
LjSGA_053525.1
M02518_2.00
Lotus japonicus
GGNCCCAC

GTGGGNCC
PBM
Weirauch et al.(2014)
pTH9201
0.942 0.393
TCP7
M07294_2.00
Arabidopsis thaliana
RTGGGNCCCAC

GTGGGNCCCAY
Dap-seq
OMalley et al.(2016)
TCP7_col_a
0.941 0.400
OsI_08196
M02513_2.00
Oryza sativa
GGGCCCAC

GTGGGCCC
PBM
Weirauch et al.(2014)
pTH9274
0.941 0.380
AT-TCP20
M02507_2.00
Arabidopsis lyrata
GRSCCCAC

GTGGGSYC
PBM
Weirauch et al.(2014)
pTH9229
0.941 0.393
TCP21
M07292_2.00
Arabidopsis thaliana
NNRTGGGDCCCACN

NGTGGGHCCCAYNN
Dap-seq
OMalley et al.(2016)
At5g08330_col_a
0.940 0.387
TCP21
M07293_2.00
Arabidopsis thaliana
RTRGGDCCCACH

DGTGGGHCCYAY
Dap-seq
OMalley et al.(2016)
At5g08330_colamp_a
0.940 0.387
TCP20
M02502_2.00
Arabidopsis thaliana
GGSCCCACNN

NNGTGGGSCC
PBM
Weirauch et al.(2014)
pTH8159
0.940 0.380
TCP20
M07285_2.00
Arabidopsis thaliana
NNNNNNNNNNGTGGGRCCCAC

GTGGGYCCCACNNNNNNNNNN
Dap-seq
OMalley et al.(2016)
TCP20_col_a
0.940 0.380
TCP20
M07286_2.00
Arabidopsis thaliana
RTGGGDCCCACH

DGTGGGHCCCAY
Dap-seq
OMalley et al.(2016)
TCP20_colamp_a
0.940 0.380
TCP20
M11397_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP20_01
0.940 0.380
PK14653.1
M01317_2.00
Cannabis sativa
BGGSCCCAC

GTGGGSCCV
PBM
Lambert et al.(2019)
pTH11324
0.940 0.387
PK14653.1
M02517_2.00
Cannabis sativa
BTGGGCCCAV

BTGGGCCCAV
PBM
Weirauch et al.(2014)
pTH9586
0.940 0.387
OS02G0635800
M02512_2.00
Oryza sativa
NBGGGCCCVN

NBGGGCCCVN
PBM
Weirauch et al.(2014)
pTH8856
0.937 0.367
cassava45561.m1
M02516_2.00
Manihot esculenta
KGGVCCCACH

DGTGGGBCCM
PBM
Weirauch et al.(2014)
pTH9207
0.930 0.387
TCP11
M11395_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_01
0.893 0.387
TCP11
M11396_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TCP11_02
0.893 0.387
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si026501m TCP 48 212

Links

Other TCP family TFs
Other Setaria italica TFs

652 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000008139 Ailuropoda melanoleuca ENSAMEG00000008139 I 0.000
ZNF641 Bos taurus ENSBTAG00000016496 I 0.000
ZNF641 Canis familiaris ENSCAFG00000009010 I 0.000
ZNF641 Callithrix jacchus ENSCJAG00000020716 I 0.000
ZNF641 Cavia porcellus ENSCPOG00000002770 I 0.000
ENSCSAG00000006278 Chlorocebus sabaeus ENSCSAG00000006278 I 0.000
ZNF641 Dasypus novemcinctus ENSDNOG00000014189 I 0.000
Zfp641 Dipodomys ordii ENSDORG00000011810 I 0.000
ZNF641 Equus caballus ENSECAG00000022720 I 0.000
ZNF641 Erinaceus europaeus ENSEEUG00000002648 I 0.000
ZNF641 Echinops telfairi ENSETEG00000017660 I 0.000
ZNF641 Felis catus ENSFCAG00000001972 I 0.000
ZNF641 Homo sapiens ENSG00000167528 D 0.000
ZNF641 Gorilla gorilla ENSGGOG00000013643 I 0.000
ZNF641 Microcebus murinus ENSMICG00000007360 I 0.000
ZNF641 Myotis lucifugus ENSMLUG00000003695 I 0.000
ZNF641 Macaca mulatta ENSMMUG00000014484 I 0.000
ENSMMUP00000019015 Macaca fascicularis ENSMMUP00000019015 I 0.000
ENSMPUG00000000169 Mustela putorius furo ENSMPUG00000000169 I 0.000
Zfp641 Mus musculus ENSMUSG00000022987 I 0.000
ENSNLEG00000017881 Nomascus leucogenys ENSNLEG00000017881 I 0.000
ENSOARG00000019279 Ovis aries ENSOARG00000019279 I 0.000
ZNF641 Oryctolagus cuniculus ENSOCUG00000005451 I 0.000
ZNF641 Otolemur garnettii ENSOGAG00000005519 I 0.000
ENSP00000301042-D1 Bos grunniens ENSP00000301042-D1 I 0.000
ENSPANG00000014075 Papio anubis ENSPANG00000014075 I 0.000
ZNF641 Procavia capensis ENSPCAG00000005206 I 0.000
ENSPPYG00000004457 Pongo abelii ENSPPYG00000004457 I 0.000
ZNF641 Pan troglodytes ENSPTRG00000004878 I 0.000
Zfp641 Rattus norvegicus ENSRNOG00000032447 I 0.000
ZNF641 Sorex araneus ENSSARG00000009301 I 0.000
ZNF641 Sus scrofa ENSSSCG00000021654 I 0.000
ENSSTOG00000001970 Ictidomys tridecemlineatus ENSSTOG00000001970 I 0.000
ZNF641 Tupaia belangeri ENSTBEG00000002375 I 0.000
ENSTSYG00000001375 Tarsius syrichta ENSTSYG00000001375 I 0.000
ZNF641 Tursiops truncatus ENSTTRG00000015952 I 0.000
Myotis_brandtii_ZNF641_10022121 Myotis brandtii Myotis_brandtii_ZNF641_10022121 I 0.000