Pavir.J38641 (Panicum virgatum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Pavir.J38641 T345028_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J38641.1.p TCP 1 152

Links

Other TCP family TFs
Other Panicum virgatum TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OB12G25740 Oryza brachyantha OB12G25740 N 0.940
Traes_2DL_01D9C842D Triticum aestivum Traes_2DL_01D9C842D I 0.928
Si036075m.g Setaria italica Si036075m.g I 0.912
GRMZM2G089361 Zea mays GRMZM2G089361 I 0.878
ORUFI07G02160 Oryza rufipogon ORUFI07G02160 N 0.878
GRMZM2G115516 Zea mays GRMZM2G115516 I 0.876
Sb01g006020 Sorghum bicolor Sb01g006020 I 0.871
Si029871m.g Setaria italica Si029871m.g I 0.870
OMERI04G02350 Oryza meridionalis OMERI04G02350 N 0.863
Pavir.Ia00505 Panicum virgatum Pavir.Ia00505 I 0.850
LjSGA_135269.1 Lotus japonicus LjSGA_135269.1 N 0.843
OMERI08G12580 Oryza meridionalis OMERI08G12580 N 0.830
SELMODRAFT_29160 Selaginella moellendorffii SELMODRAFT_29160 I 0.827
SELMODRAFT_29162 Selaginella moellendorffii SELMODRAFT_29162 I 0.825
Traes_5BS_77558D2A3 Triticum aestivum Traes_5BS_77558D2A3 I 0.823