Gfo_R004116 (Geospiza fortis)
THAP finger

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05485 (THAP) IPR006612 Gfo_R004116 T349360_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
THAP1
M08176_2.00 		Homo sapiens
DNHKGGMRR
YYKCCMDNH		 ChIP-seq
Mathelier et al.(2014)
MA0597.1 		0.930 0.930
THAP1
M08020_2.00 		Homo sapiens
SGCCATBTTKRNWVHGGGCRR
YYGCCCDBWNYMAAVATGGCS		 ChIP-seq
Gerstein et al.(2012)
K562_THAP1_HudsonAlpha 		0.930 0.930
THAP1
M09439_2.00 		Homo sapiens
GCCCDVVNBVRVSVKGGCBSCB
VGSVGCCMBSBYBVNBBHGGGC		 Misc
Kulakovskiy et al.(2013)
THAP1_HUMAN.H11MO.0.C 		0.930 0.930
THAP1
M11412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$THAP1_01 		0.930 0.930
THAP1
M11413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$THAP1_02 		0.930 0.930
THAP1
M11414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$THAP1_04 		0.930 0.930
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R004116 THAP finger 1 60

Links

Other THAP finger family TFs
Other Geospiza fortis TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDOA009204 Musca domestica MDOA009204 N 0.000
ACUA013910 Anopheles culicifacies ACUA013910 N 0.000
ACOM035651 Anopheles coluzzii ACOM035651 N 0.000
ACHR009624 Anopheles christyi ACHR009624 N 0.000
AATE013967 Anopheles atroparvus AATE013967 N 0.000
AARA001286 Anopheles arabiensis AARA001286 N 0.000
AALB007161 Anopheles albimanus AALB007161 N 0.000
LCUP015496 Lucilia cuprina LCUP015496 N 0.000
CLEC002671 Cimex lectularius CLEC002671 N 0.000
Hsal_11237--XP_623422.1_APIME Harpegnathos saltator Hsal_11237--XP_623422.1_APIME N 0.000
ADIR002733 Anopheles dirus ADIR002733 N 0.000
AEPI010102 Anopheles epiroticus AEPI010102 N 0.000
AFAF010814 Anopheles farauti AFAF010814 N 0.000
LLOJ008283 Lutzomyia longipalpis LLOJ008283 N 0.000
ASTEI07925 Anopheles stephensi ASTEI07925 N 0.000
ASIS007602 Anopheles sinensis ASIS007602 N 0.000
AQUA008103 Anopheles quadriannulatus AQUA008103 N 0.000
AMIN002484 Anopheles minimus AMIN002484 N 0.000
AMEM000184 Anopheles merus AMEM000184 N 0.000
AMEC016768 Anopheles melas AMEC016768 N 0.000
AMAM001843 Anopheles maculatus AMAM001843 N 0.000
AFUN003769 Anopheles funestus AFUN003769 N 0.000
Cflo_08340--XP_623422.1_APIME Camponotus floridanus Cflo_08340--XP_623422.1_APIME N 0.000
TC006410 Tribolium castaneum TC006410 N 0.000
SINV13172 Solenopsis invicta SINV13172 N 0.000
GH14679 Drosophila grimshawi FBgn0122155 N 0.000
GG13772 Drosophila erecta FBgn0106035 N 0.000
GF10955 Drosophila ananassae FBgn0087995 N 0.000
CG32121 Drosophila melanogaster FBgn0052121 N 0.000
CPIJ013200 Culex quinquefasciatus CPIJ013200 N 0.000
AGAP003189 Anopheles gambiae AGAP003189 N 0.000
ADAC008479 Anopheles darlingi ADAC008479 N 0.000
ACEP13077 Atta cephalotes ACEP13077 N 0.000
AAEL011779 Aedes aegypti AAEL011779 N 0.000
GI13789 Drosophila mojavensis FBgn0136544 N 0.000
GL25434 Drosophila persimilis FBgn0163018 N 0.000
GM24596 Drosophila sechellia FBgn0179459 N 0.000
RPRC004779 Rhodnius prolixus RPRC004779 N 0.000
PHUM002640 Pediculus humanus PHUM002640 N 0.000
MESCA007857 Megaselia scalaris MESCA007857 N 0.000
L798_04947 Zootermopsis nevadensis L798_04947 N 0.000
HMEL009675 Heliconius melpomene HMEL009675 N 0.000
GB44769 Apis mellifera GB44769 N 0.000
GE20067 Drosophila yakuba FBgn0237391 N 0.000
GJ13592 Drosophila virilis FBgn0200814 N 0.000
GD12665 Drosophila simulans FBgn0184392 N 0.000
CpipJ_CPIJ013200 Culex pipiens CpipJ_CPIJ013200 N 0.000