POPTR_0006s19850 (Populus trichocarpa)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 POPTR_0006s19850 T354371_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05432.1
M01324_2.00 		Cannabis sativa
NNRGTCARH
DYTGACYNN		 PBM
Lambert et al.(2019)
pTH11342 		0.814 0.667
WRKY26
M07418_2.00 		Arabidopsis thaliana
MWAAGTCAACGNH
DNCGTTGACTWWK		 Dap-seq
OMalley et al.(2016)
WRKY26_col_a 		0.811 0.655
WRKY26
M07419_2.00 		Arabidopsis thaliana
HMWAGTCAAMR
YKTTGACTWKD		 Dap-seq
OMalley et al.(2016)
WRKY26_colamp_a 		0.811 0.655
WRKY33
M02554_2.00 		Arabidopsis thaliana
NNRGTCHDNN
NNHDGACYNN		 PBM
Weirauch et al.(2014)
pTH8183 		0.810 0.631
WRKY33
M07391_2.00 		Arabidopsis thaliana
HWWAGTCAAMD
HKTTGACTWWD		 Dap-seq
OMalley et al.(2016)
WRKY33_col_a 		0.810 0.631
Q40090_IPOBA
M11466_2.00 		Ipomoea batatas Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPF1_Q2 		0.808 0.631
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s19850.1 WRKY 95 151
POPTR_0006s19850.1 WRKY 281 307

Links

Other WRKY family TFs
Other Populus trichocarpa TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.1152s0100 Salix purpurea SapurV1A.1152s0100 I 0.837
SapurV1A.4039s0010 Salix purpurea SapurV1A.4039s0010 I 0.836
POPTR_0018s11630 Populus trichocarpa POPTR_0018s11630 I 0.835
Carubv10006890m.g Capsella rubella Carubv10006890m.g I 0.835
Cagra.0380s0033 Capsella grandiflora Cagra.0380s0033 I 0.835
Bostr.7867s0950 Boechera stricta Bostr.7867s0950 I 0.835
cassava37656.valid.m1 Manihot esculenta cassava37656.valid.m1 I 0.834
WRKY32 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000852 I 0.834
WRKY32 Arabidopsis thaliana AT4G30935 I 0.834
Gorai.010G113000 Gossypium raimondii Gorai.010G113000 I 0.833
Ciclev10008135m.g Citrus clementina Ciclev10008135m.g I 0.833
orange1.1g036653m.g Citrus sinensis orange1.1g036653m.g I 0.833
Bo7g114840 Brassica oleracea Bo7g114840 I 0.831
TCM_037060 Theobroma cacao TCM_037060 I 0.830
Lus10036268.g Linum usitatissimum Lus10036268.g I 0.830
Lus10022150.g Linum usitatissimum Lus10022150.g I 0.830
mgf012709m Mimulus guttatus mgf012709m I 0.829
Bra024035 Brassica rapa Bra024035 I 0.829
Cucsa.093390 Cucumis sativus Cucsa.093390 I 0.829
WRKY32 Vitis vinifera VIT_11s0037g00150 I 0.829
Thhalv10025126m.g Eutrema salsugineum Thhalv10025126m.g I 0.829
PRUPE_ppa004042mg Prunus persica PRUPE_ppa004042mg I 0.828
Pm027732 Prunus mume Pm027732 I 0.828
Bra010266 Brassica rapa Bra010266 I 0.828
MDP0000131218 Malus domestica MDP0000131218 I 0.828
MDP0000293456 Malus domestica MDP0000293456 I 0.826
Cla019018 Citrullus lanatus Cla019018 I 0.826
GLYMA17G08170 Glycine max GLYMA17G08170 I 0.825
gene10079-v1.0-hybrid Fragaria vesca gene10079-v1.0-hybrid I 0.825
GLYMA02G36510 Glycine max GLYMA02G36510 I 0.825
Solyc07g005650.2 Solanum lycopersicum Solyc07g005650.2 I 0.824
Gorai.001G032200 Gossypium raimondii Gorai.001G032200 I 0.824
Bo3g175320 Brassica oleracea Bo3g175320 I 0.824
PK26499.1 Cannabis sativa PK26499.1 I 0.822
chr4.CM0179.130.nc Lotus japonicus chr4.CM0179.130.nc I 0.820
chr6.CM0037.700.nc Lotus japonicus chr6.CM0037.700.nc I 0.820
Eucgr.C00348 Eucalyptus grandis Eucgr.C00348 I 0.818
Eucgr.C02545 Eucalyptus grandis Eucgr.C02545 I 0.818
Ca_03331 Cicer arietinum Ca_03331 I 0.817
mgf020482m Mimulus guttatus mgf020482m I 0.817
VIT_04s0008g06600 Vitis vinifera VIT_04s0008g06600 I 0.816
29820.m001029 Ricinus communis 29820.m001029 I 0.814
cassava1059.valid.m1 Manihot esculenta cassava1059.valid.m1 I 0.814
cassava22187.valid.m1 Manihot esculenta cassava22187.valid.m1 I 0.814
cassava22188.valid.m1 Manihot esculenta cassava22188.valid.m1 I 0.814
29717.m000222 Ricinus communis 29717.m000222 I 0.814
GLYMA14G38010 Glycine max GLYMA14G38010 I 0.814
TCM_021580 Theobroma cacao TCM_021580 I 0.814
GSMUA_Achr11G10700_001 Musa acuminata GSMUA_Achr11G10700_001 I 0.814
AMTR_s00023p00102530 Amborella trichopoda AMTR_s00023p00102530 I 0.814
GLYMA18G06360 Glycine max GLYMA18G06360 I 0.814
GLYMA12G23950 Glycine max GLYMA12G23950 I 0.814
GLYMA11G29720 Glycine max GLYMA11G29720 I 0.814
Lus10012215.g Linum usitatissimum Lus10012215.g I 0.814
PK05432.1 Cannabis sativa PK05432.1 D 0.814
PK20695.1 Cannabis sativa PK20695.1 I 0.814
chr2.CM0058.50.nc Lotus japonicus chr2.CM0058.50.nc I 0.814
Lus10001265.g Linum usitatissimum Lus10001265.g I 0.814
Gorai.012G119600 Gossypium raimondii Gorai.012G119600 I 0.814
GLYMA02G39870 Glycine max GLYMA02G39870 I 0.814
evm.TU.supercontig_2.345 Carica papaya evm.TU.supercontig_2.345 I 0.814
Gorai.003G150700 Gossypium raimondii Gorai.003G150700 I 0.814
POPTR_0016s13600 Populus trichocarpa POPTR_0016s13600 I 0.814
cassava24475.valid.m1 Manihot esculenta cassava24475.valid.m1 I 0.814
OB01G44510 Oryza brachyantha OB01G44510 I 0.814
MTR_4g130900 Medicago truncatula MTR_4g130900 I 0.814
Solyc06g066370.2 Solanum lycopersicum Solyc06g066370.2 I 0.813
SapurV1A.0466s0170 Salix purpurea SapurV1A.0466s0170 I 0.813
mgf003063m Mimulus guttatus mgf003063m I 0.813
Traes_1AS_F3EAEC435 Triticum aestivum Traes_1AS_F3EAEC435 I 0.813
SapurV1A.0001s0200 Salix purpurea SapurV1A.0001s0200 I 0.813
Traes_1BS_EF67E5A24 Triticum aestivum Traes_1BS_EF67E5A24 I 0.813
OPUNC08G17390 Oryza punctata OPUNC08G17390 I 0.813
TRIUR3_02376 Triticum urartu TRIUR3_02376 I 0.813
Traes_1DS_A6733B734 Triticum aestivum Traes_1DS_A6733B734 I 0.813
F775_28497 Aegilops tauschii F775_28497 I 0.813
GLYMA06G27440 Glycine max GLYMA06G27440 I 0.813
Eucgr.C02481 Eucalyptus grandis Eucgr.C02481 I 0.813
Bo4g187630 Brassica oleracea Bo4g187630 I 0.813
PGSC0003DMG400016769 Solanum tuberosum PGSC0003DMG400016769 I 0.813
MDP0000935996 Malus domestica MDP0000935996 I 0.813
MTR_5g074400 Medicago truncatula MTR_5g074400 I 0.812
ONIVA05G13190 Oryza nivara ONIVA05G13190 I 0.812
OPUNC05G10620 Oryza punctata OPUNC05G10620 I 0.812
Cla008232 Citrullus lanatus Cla008232 I 0.812
BGIOSGA019646 Oryza indica BGIOSGA019646 I 0.812
Ca_17273 Cicer arietinum Ca_17273 I 0.812
OB05G20640 Oryza brachyantha OB05G20640 I 0.812
LPERR05G09800 Leersia perrieri LPERR05G09800 I 0.812
GRMZM2G012724 Zea mays GRMZM2G012724 I 0.812
ORUFI09G08210 Oryza rufipogon ORUFI09G08210 I 0.812
OBART05G12450 Oryza barthii OBART05G12450 I 0.812
Eucgr.A01195 Eucalyptus grandis Eucgr.A01195 I 0.812
Pavir.Ca01475 Panicum virgatum Pavir.Ca01475 I 0.812
BRADI2G00280 Brachypodium distachyon BRADI2G00280 I 0.812
F775_09872 Aegilops tauschii F775_09872 I 0.812
OGLUM05G13190 Oryza glumaepatula OGLUM05G13190 I 0.812
Cucsa.111910 Cucumis sativus Cucsa.111910 I 0.812
evm.TU.supercontig_5.248 Carica papaya evm.TU.supercontig_5.248 I 0.812
OGLUM08G20430 Oryza glumaepatula OGLUM08G20430 I 0.812
TCM_042240 Theobroma cacao TCM_042240 I 0.812
MLOC_58019 Hordeum vulgare MLOC_58019 I 0.812
LPERR08G16240 Leersia perrieri LPERR08G16240 I 0.812
ORGLA05G0106500 Oryza glaberrima ORGLA05G0106500 I 0.812
Si021956m.g Setaria italica Si021956m.g I 0.812
POPTR_0013s14960 Populus trichocarpa POPTR_0013s14960 I 0.812
Sb09g015900 Sorghum bicolor Sb09g015900 I 0.812
Traes_5AL_ED3ADED51 Triticum aestivum Traes_5AL_ED3ADED51 I 0.812
Traes_5DL_21F7C6BF7 Triticum aestivum Traes_5DL_21F7C6BF7 I 0.812
VIT_06s0004g07500 Vitis vinifera VIT_06s0004g07500 I 0.812
POPTR_0019s14460 Populus trichocarpa POPTR_0019s14460 I 0.812
Traes_5BL_17A712C94 Triticum aestivum Traes_5BL_17A712C94 I 0.812
OS05G0343400 Oryza sativa OS05G0343400 I 0.812
ORUFI08G21630 Oryza rufipogon ORUFI08G21630 I 0.811
WRKY26 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000545 I 0.811
Bostr.13129s0259 Boechera stricta Bostr.13129s0259 I 0.811
Bo2g007520 Brassica oleracea Bo2g007520 I 0.811
PRUPE_ppa003333mg Prunus persica PRUPE_ppa003333mg I 0.811
Cagra.16435s0012 Capsella grandiflora Cagra.16435s0012 I 0.811
Bra028707 Brassica rapa Bra028707 I 0.811
PRUPE_ppa004009mg Prunus persica PRUPE_ppa004009mg I 0.811
gene28174-v1.0-hybrid Fragaria vesca gene28174-v1.0-hybrid I 0.811
Eucgr.B04010 Eucalyptus grandis Eucgr.B04010 I 0.811
AMTR_s00088p00164440 Amborella trichopoda AMTR_s00088p00164440 I 0.811
Ciclev10000654m.g Citrus clementina Ciclev10000654m.g I 0.811
orange1.1g011483m.g Citrus sinensis orange1.1g011483m.g I 0.811
OMERI08G15980 Oryza meridionalis OMERI08G15980 I 0.811
OLONG_024935 Oryza longistaminata OLONG_024935 I 0.811
OLONG_005331 Oryza longistaminata OLONG_005331 I 0.811
MDP0000514115 Malus domestica MDP0000514115 I 0.811
BGIOSGA026734 Oryza indica BGIOSGA026734 I 0.811
Pm029293 Prunus mume Pm029293 I 0.811
MDP0000507805 Malus domestica MDP0000507805 I 0.811
Pm000163 Prunus mume Pm000163 I 0.811
ONIVA08G21410 Oryza nivara ONIVA08G21410 I 0.811
SapurV1A.0433s0130 Salix purpurea SapurV1A.0433s0130 I 0.811
WRKY26 Arabidopsis thaliana AT5G07100 D 0.811
ORGLA08G0170100 Oryza glaberrima ORGLA08G0170100 I 0.811
SapurV1A.0222s0350 Salix purpurea SapurV1A.0222s0350 I 0.811
OBART08G19340 Oryza barthii OBART08G19340 I 0.811
OS08G0499300 Oryza sativa OS08G0499300 I 0.811
OB08G26390 Oryza brachyantha OB08G26390 I 0.810
Bo3g032500 Brassica oleracea Bo3g032500 I 0.810
Bra005104 Brassica rapa Bra005104 I 0.810
Bo4g027280 Brassica oleracea Bo4g027280 I 0.810
Bra000064 Brassica rapa Bra000064 I 0.810
orange1.1g013222m.g Citrus sinensis orange1.1g013222m.g I 0.810
Lus10026634.g Linum usitatissimum Lus10026634.g I 0.810
LjSGA_014003.1 Lotus japonicus LjSGA_014003.1 I 0.810
Bra017117 Brassica rapa Bra017117 I 0.810
WRKY33 Arabidopsis lyrata fgenesh2_kg.4__1917__AT2G38470.1 I 0.810
gw1.35.201.1 Physcomitrella patens gw1.35.201.1 I 0.810
MTR_3g031220 Medicago truncatula MTR_3g031220 I 0.810
Si013374m.g Setaria italica Si013374m.g I 0.810
gw1.157.36.1 Physcomitrella patens gw1.157.36.1 I 0.810
Pm015937 Prunus mume Pm015937 I 0.810
WRKY58 Vitis vinifera VIT_14s0108g01280 I 0.810
VIT_08s0058g00690 Vitis vinifera VIT_08s0058g00690 I 0.810
Thhalv10016542m.g Eutrema salsugineum Thhalv10016542m.g I 0.810
PRUPE_ppa003809mg Prunus persica PRUPE_ppa003809mg I 0.810
WRKY33 Arabidopsis thaliana AT2G38470 D 0.810
Aquca_002_00721 Aquilegia coerulea Aquca_002_00721 I 0.810
Carubv10023006m.g Capsella rubella Carubv10023006m.g I 0.810
Ciclev10011386m.g Citrus clementina Ciclev10011386m.g I 0.810
Cagra.2692s0006 Capsella grandiflora Cagra.2692s0006 I 0.810
Carubv10001478m.g Capsella rubella Carubv10001478m.g I 0.810
GRMZM2G449681 Zea mays GRMZM2G449681 I 0.810
Pavir.J35763 Panicum virgatum Pavir.J35763 I 0.810
Bostr.23794s0221 Boechera stricta Bostr.23794s0221 I 0.810
AMTR_s00089p00116340 Amborella trichopoda AMTR_s00089p00116340 I 0.809
MDP0000708692 Malus domestica MDP0000708692 I 0.809
MDP0000648338 Malus domestica MDP0000648338 I 0.809
mgf014245m Mimulus guttatus mgf014245m I 0.809
Ca_08975 Cicer arietinum Ca_08975 I 0.809
MDP0000431358 Malus domestica MDP0000431358 I 0.809
cassava42912.valid.m1 Manihot esculenta cassava42912.valid.m1 I 0.809
TCM_025248 Theobroma cacao TCM_025248 I 0.809
Solyc09g014990.2 Solanum lycopersicum Solyc09g014990.2 I 0.809
PGSC0003DMG400011633 Solanum tuberosum PGSC0003DMG400011633 I 0.809
LPERR01G30770 Leersia perrieri LPERR01G30770 I 0.809
GSMUA_Achr7G00610_001 Musa acuminata GSMUA_Achr7G00610_001 I 0.809
mgf001151m Mimulus guttatus mgf001151m I 0.809
29929.m004587 Ricinus communis 29929.m004587 I 0.809
MDP0000195385 Malus domestica MDP0000195385 I 0.809
MDP0000296025 Malus domestica MDP0000296025 I 0.809
mgf005776m Mimulus guttatus mgf005776m I 0.809
Gorai.013G179400 Gossypium raimondii Gorai.013G179400 I 0.809
BRADI4G01950 Brachypodium distachyon BRADI4G01950 I 0.809
Lus10030424.g Linum usitatissimum Lus10030424.g I 0.808
Q40090_IPOBA Ipomoea batatas Q40090_IPOBA D 0.808
SELMODRAFT_46742 Selaginella moellendorffii SELMODRAFT_46742 I 0.808
Aquca_058_00185 Aquilegia coerulea Aquca_058_00185 I 0.808
SELMODRAFT_56793 Selaginella moellendorffii SELMODRAFT_56793 I 0.808
gene04391-v1.0-hybrid Fragaria vesca gene04391-v1.0-hybrid I 0.808
GSMUA_Achr6G03500_001 Musa acuminata GSMUA_Achr6G03500_001 I 0.808
TRIUR3_09462 Triticum urartu TRIUR3_09462 I 0.808