Bostr.4825s0004 (Boechera stricta)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Bostr.4825s0004 T355844_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY47
M00732_2.00
Arabidopsis thaliana
NNRGTCAACKN

NMGTTGACYNN
PBM
Chang et al.(2013)
pTH7913
0.907 1.000
WRKY47
M07402_2.00
Arabidopsis thaliana
WRGTCAAMGNHVDK

MHBDNCKTTGACYW
Dap-seq
OMalley et al.(2016)
WRKY47_col_a
0.907 1.000
WRKY47
M07403_2.00
Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN

NNNNDNMGTTGACYWDNNN
Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a
0.907 1.000
WRKY42
M07404_2.00
Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN

NNDNNHNNNNHGTTGACYWHN
Dap-seq
OMalley et al.(2016)
WRKY42_col_a
0.901 0.949
WRKY42
M07405_2.00
Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD

HHNDNMGTTGACYWNNNHND
Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a
0.901 0.949
WRKY6
M07377_2.00
Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG

CGTTGACYNDNDHNDNNNH
Dap-seq
OMalley et al.(2016)
WRKY6_col_a
0.892 0.915
WRKY6
M07378_2.00
Arabidopsis thaliana
NNHNWRGTCAACKNH

DNMGTTGACYWNDNN
Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a
0.892 0.915
WRKY31
M07408_2.00
Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG

CGTTGACYHNNNNNDNNNN
Dap-seq
OMalley et al.(2016)
WRKY31_col_a
0.887 0.915
WRKY31
M07409_2.00
Arabidopsis thaliana
NHWRGTCAACKNH

DNMGTTGACYWDN
Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a
0.887 0.915
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.4825s0004.1.p WRKY 239 297
Bostr.4825s0004.2.p WRKY 215 273

Links

Other WRKY family TFs
Other Boechera stricta TFs

620 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29596.m000720 Ricinus communis 29596.m000720 N 0.000
AMTR_s00019p00253580 Amborella trichopoda AMTR_s00019p00253580 N 0.000
cassava1724.valid.m1 Manihot esculenta cassava1724.valid.m1 N 0.000
cassava249.valid.m1 Manihot esculenta cassava249.valid.m1 N 0.000
Ca_14968 Cicer arietinum Ca_14968 N 0.000
chr1.CM0289.360.nc Lotus japonicus chr1.CM0289.360.nc N 0.000
Ciclev10002056m.g Citrus clementina Ciclev10002056m.g N 0.000
Cla022486 Citrullus lanatus Cla022486 N 0.000
Cucsa.160530 Cucumis sativus Cucsa.160530 N 0.000
Eucgr.F02157 Eucalyptus grandis Eucgr.F02157 N 0.000
evm.TU.supercontig_3189.1 Carica papaya evm.TU.supercontig_3189.1 N 0.000
gene26537-v1.0-hybrid Fragaria vesca gene26537-v1.0-hybrid N 0.000
GLYMA02G37980 Glycine max GLYMA02G37980 N 0.000
GLYMA04G10330 Glycine max GLYMA04G10330 N 0.000
GLYMA06G10280 Glycine max GLYMA06G10280 N 0.000
GLYMA14G36150 Glycine max GLYMA14G36150 N 0.000
Gorai.005G097100 Gossypium raimondii Gorai.005G097100 N 0.000
Gorai.009G279200 Gossypium raimondii Gorai.009G279200 N 0.000
Gorai.010G033500 Gossypium raimondii Gorai.010G033500 N 0.000
LjT45A20.70.nd Lotus japonicus LjT45A20.70.nd N 0.000
MDP0000303048 Malus domestica MDP0000303048 N 0.000
MTR_5g066510 Medicago truncatula MTR_5g066510 N 0.000
orange1.1g022924m.g Citrus sinensis orange1.1g022924m.g N 0.000
PGSC0003DMG400033576 Solanum tuberosum PGSC0003DMG400033576 N 0.000
PK04210.1 Cannabis sativa PK04210.1 N 0.000
Pm004390 Prunus mume Pm004390 N 0.000
POPTR_0002s11150 Populus trichocarpa POPTR_0002s11150 N 0.000
POPTR_0005s19580 Populus trichocarpa POPTR_0005s19580 N 0.000
PRUPE_ppa009340mg Prunus persica PRUPE_ppa009340mg N 0.000
SapurV1A.0004s0630 Salix purpurea SapurV1A.0004s0630 N 0.000
SapurV1A.0320s0100 Salix purpurea SapurV1A.0320s0100 N 0.000
Solyc01g106030.2 Solanum lycopersicum Solyc01g106030.2 N 0.000
Solyc10g047640.1 Solanum lycopersicum Solyc10g047640.1 N 0.000
TCM_034530 Theobroma cacao TCM_034530 N 0.000
TIFY1 Vitis vinifera VIT_18s0001g07720 N 0.000
VIT_03s0038g00480 Vitis vinifera VIT_03s0038g00480 N 0.000