CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_08099
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_08099
T358044_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_10600
M01373_2.00
Aspergillus nidulans
YCGGAWAW
WTWTCCGR
PBM
Lambert et al.(2019)
pEX0427
0.539
0.632
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_08099T0
Zinc cluster
69
106
RACDFCKTKKLKCSGTLPCDGCTKRQLSCVYDATYRRG
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_08099
Verticillium alfalfae
VDBG_08099
I
0.683
Cob_02505
Colletotrichum orbiculare
Cob_02505
I
0.682
CFIO01_05979
Colletotrichum fioriniae
CFIO01_05979
I
0.665
GLRG_08912
Colletotrichum graminicola
GLRG_08912
I
0.625
CH063_09531
Colletotrichum higginsianum
CH063_09531
I
0.625
FPSE_02066
Fusarium pseudograminearum
FPSE_02066
N
0.610
FGRRES_03159
Fusarium graminearum
FGRRES_03159
N
0.610
CSUB01_07904
Colletotrichum sublineola
CSUB01_07904
I
0.600
CFIO01_03929
Colletotrichum fioriniae
CFIO01_03929
I
0.600
CGGC5_239
Colletotrichum gloeosporioides
CGGC5_239
I
0.600
GLRG_08945
Colletotrichum graminicola
GLRG_08945
I
0.600
FFUJ_05172
Fusarium fujikuroi
FFUJ_05172
N
0.570
FOXG_08728
Fusarium oxysporum
FOXG_08728
N
0.570
FVEG_05935
Fusarium verticillioides
FVEG_05935
N
0.570
PFICI_12506
Pestalotiopsis fici
PFICI_12506
I
0.567
HMPREF1624_05727
Sporothrix schenckii
HMPREF1624_05727
I
0.561
TRIATDRAFT_279663
Trichoderma atroviride
TRIATDRAFT_279663
N
0.558
Bcin03g00220
Botrytis cinerea
Bcin03g00220
N
0.558
TRIVIDRAFT_124588
Trichoderma virens
TRIVIDRAFT_124588
N
0.558
CCM_05077
Cordyceps militaris
CCM_05077
N
0.558
AOL_s00007g13
Arthrobotrys oligospora
AOL_s00007g13
N
0.553
AFUA_6G00120
Aspergillus fumigatus
CADAFUAG00001512
N
0.551
NechaG87897
Fusarium solani
NechaG87897
N
0.549
fgenesh1_pg.sca_15_chr12_5_0000334
Nectria haematococca
fgenesh1_pg.sca_15_chr12_5_0000334
N
0.549
CD36_42110
Candida dubliniensis
CD36_42110
N
0.548
PFICI_12511
Pestalotiopsis fici
PFICI_12511
N
0.548
G210_1055
Candida maltosa
G210_1055
N
0.547
ANIA_12314
Aspergillus nidulans
CADANIAG00010387
N
0.547
CaO19.10267
Candida albicans
CaO19.10267
N
0.547
CD36_42070
Candida dubliniensis
CD36_42070
N
0.547
SPAPADRAFT_131954
Spathaspora passalidarum
SPAPADRAFT_131954
N
0.547
CD36_42370
Candida dubliniensis
CD36_42370
N
0.547
CTRG_00024
Candida tropicalis
CTRG_00024
N
0.547
CaO19.2753
Candida albicans
CaO19.2753
N
0.547
Cob_02464
Colletotrichum orbiculare
Cob_02464
N
0.542
COCMIDRAFT_48551
Bipolaris oryzae
COCMIDRAFT_48551
I
0.541
COCSADRAFT_143282
Bipolaris sorokiniana
COCSADRAFT_143282
I
0.541
ANIA_10600
Aspergillus nidulans
CADANIAG00005586
D
0.539
CPAG_03993
Candida parapsilosis
CPAG_03993
N
0.539
CORT_0E01540
Candida orthopsilosis
CORT_0E01540
N
0.539
CADAFLAG00010143
Aspergillus flavus
CADAFLAG00010143
I
0.538
CADAORAG00012148
Aspergillus oryzae
CADAORAG00012148
I
0.538