CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_15_chr12_5_0000334
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.sca_15_chr12_5_0000334
T390139_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_15_chr12_5_0000334
Zinc cluster
47
84
RACDHCKVKKLKCTGTLPCDGCSKKSIDCHYDTQYRRG
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG87897
Fusarium solani
NechaG87897
N
0.683
FVEG_05935
Fusarium verticillioides
FVEG_05935
N
0.602
FOXG_08728
Fusarium oxysporum
FOXG_08728
N
0.602
FFUJ_05172
Fusarium fujikuroi
FFUJ_05172
N
0.602
FPSE_02066
Fusarium pseudograminearum
FPSE_02066
N
0.588
FGRRES_03159
Fusarium graminearum
FGRRES_03159
N
0.588
CCM_08245
Cordyceps militaris
CCM_08245
N
0.569
S40288_09024
Stachybotrys chartarum
S40288_09024
N
0.565
CADAFLAG00009874
Aspergillus flavus
CADAFLAG00009874
I
0.557
fgenesh1_pm.00118_#_302
Aspergillus carbonarius
fgenesh1_pm.00118_#_302
I
0.557
ATEG_05796
Aspergillus terreus
CADATEAG00000622
I
0.557
PFICI_12506
Pestalotiopsis fici
PFICI_12506
I
0.557
CADANGAG00007822
Aspergillus niger
CADANGAG00007822
I
0.557
CADAORAG00000469
Aspergillus oryzae
CADAORAG00000469
I
0.557
CORT_0E01540
Candida orthopsilosis
CORT_0E01540
N
0.556
VDBG_08099
Verticillium alfalfae
VDBG_08099
I
0.549
VDBG_08099
Verticillium albo atrum
VDBG_08099
I
0.549
MAPG_11907
Magnaporthe poae
MAPG_11907
N
0.548
Cob_02505
Colletotrichum orbiculare
Cob_02505
I
0.548
VDAG_02146
Verticillium dahliae
VDAG_02146
N
0.543
VDBG_03239
Verticillium alfalfae
VDBG_03239
N
0.543
VDBG_03239
Verticillium albo atrum
VDBG_03239
N
0.543
EURHEDRAFT_412373
Aspergillus ruber
EURHEDRAFT_412373
I
0.542
CADANGAG00001480
Aspergillus niger
CADANGAG00001480
I
0.541
AUEXF2481DRAFT_445436
Aureobasidium subglaciale
AUEXF2481DRAFT_445436
I
0.540
AOL_s00007g13
Arthrobotrys oligospora
AOL_s00007g13
N
0.538
fgenesh1_pm.00042_#_4
Aspergillus carbonarius
fgenesh1_pm.00042_#_4
I
0.538