NDAI_0C04170 (Naumovozyma dairenensis)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 NDAI_0C04170 T375427_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RSC3
M00082_2.00
Saccharomyces cerevisiae
GCGCGCGG

CCGCGCGC
PBM
Badis et al.(2008)
RSC3_2035
0.611 0.872
RSC3
M01576_2.00
Saccharomyces cerevisiae
NNNNNSCGNN

NNCGSNNNNN
PBM
Zhu et al.(2009)
Rsc3
0.611 0.872
RSC3
M07509_2.00
Saccharomyces cerevisiae
NNVCGCG

CGCGBNN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0374.1
0.611 0.872
RSC3
M08655_2.00
Saccharomyces cerevisiae
NNVCGCG

CGCGBNN
Misc
DeBoer et al.(2011)
YDR303C_580
0.611 0.872
RSC30
M00086_2.00
Saccharomyces cerevisiae
NGCGCGCGSN

NSCGCGCGCN
PBM
Badis et al.(2008)
RSC30_2087
0.537 0.769
RSC30
M01580_2.00
Saccharomyces cerevisiae
NNDCGSVNN

NNBSCGHNN
PBM
Zhu et al.(2009)
Rsc30
0.537 0.769
RSC30
M07513_2.00
Saccharomyces cerevisiae
VSCGCGCS

SGCGCGSB
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0375.1
0.537 0.769
RSC30
M08663_2.00
Saccharomyces cerevisiae
HNHVHCSCGCGCGSGNDVSVN

NBSBHNCSCGCGCGSGDBDND
Misc
DeBoer et al.(2011)
YHR056C_857
0.537 0.769
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCD24077 Zinc cluster 12 51

Links

Other Zinc cluster family TFs
Other Naumovozyma dairenensis TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGOS_AAL057C Ashbya gossypii AGOS_AAL057C I 0.584
Ecym_3200 Eremothecium cymbalariae Ecym_3200 I 0.592
KAFR_0E01300 Kazachstania africana KAFR_0E01300 I 0.651
SAKL0G09768g Lachancea kluyveri SAKL0G09768g I 0.577
NCAS_0F02700 Naumovozyma castellii NCAS_0F02700 I 0.659
SU7_2665 Saccharomyces arboricola SU7_2665 I 0.611
SU7_1441 Saccharomyces arboricola SU7_1441 I 0.537
4894_YDR303C Saccharomyces bayanus 4894_YDR303C I 0.611
10337_Multiple Saccharomyces bayanus 10337_Multiple I 0.537
Scas_Contig588.11 Saccharomyces castellii Scas_Contig588.11 I 0.659
RSC3 Saccharomyces cerevisiae YDR303C D 0.611
RSC30 Saccharomyces cerevisiae YHR056C D 0.537
SKUD_196709 Saccharomyces kudriavzevii SKUD_196709 I 0.611
9825_Multiple Saccharomyces mikatae 9825_Multiple I 0.537
4855_Multiple Saccharomyces paradoxus 4855_Multiple I 0.611
10181_Multiple Saccharomyces paradoxus 10181_Multiple I 0.537
AACERI_AaceriAAL057C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL057C I 0.584
TBLA_0C03390 Tetrapisispora blattae TBLA_0C03390 I 0.571
TPHA_0E01290 Tetrapisispora phaffii TPHA_0E01290 I 0.601
TDEL_0E03050 Torulaspora delbrueckii TDEL_0E03050 I 0.569
Kpol_1023p41 Vanderwaltozyma polyspora Kpol_1023p41 I 0.609
Kpol_1005p2 Vanderwaltozyma polyspora Kpol_1005p2 I 0.611
ZBAI_09770 Zygosaccharomyces bailii ZBAI_09770 I 0.587
ZBAI_03963 Zygosaccharomyces bailii ZBAI_03963 I 0.587
ZYRO0C13882g Zygosaccharomyces rouxii ZYRO0C13882g I 0.594