CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PICST_77168
(
Scheffersomyces stipitis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PICST_77168
T378590_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ASG1
M00088_2.00
Saccharomyces cerevisiae
CGGRDNN
NNHYCCG
PBM
Badis et al.(2008)
ASG1_2140
0.571
0.763
ASG1
M01581_2.00
Saccharomyces cerevisiae
NCGGNDNN
NNHNCCGN
PBM
Zhu et al.(2009)
Asg1
0.571
0.763
ASG1
M07515_2.00
Saccharomyces cerevisiae
CCGGAW
WTCCGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0275.1
0.571
0.763
ASG1
M08666_2.00
Saccharomyces cerevisiae
CCGGAW
WTCCGG
Misc
DeBoer et al.(2011)
YIL130W_529
0.571
0.763
ASG1
M08667_2.00
Saccharomyces cerevisiae
CCGGVWMHMDBCCGGD
HCCGGVHKDKWBCCGG
Misc
DeBoer et al.(2011)
YIL130W_807
0.571
0.763
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ABN65283
Zinc cluster
62
99
RACDNCRQKKVKCDGKQPCIHCTVYSYKCTYDQPNVRN
Links
Other
Zinc cluster
family TFs
Other
Scheffersomyces stipitis
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_genewise1_worm.C_chr_3.11235
Pichia stipitis
estExt_genewise1_worm.C_chr_3.11235
I
0.683
SPAPADRAFT_49410
Spathaspora passalidarum
SPAPADRAFT_49410
I
0.669
CLUG_02747
Clavispora lusitaniae
CLUG_02747
I
0.651
CLUG_02747
Candida lusitaniae
CLUG_02747
I
0.651
GNLVRS01_PISO0F02997g
Millerozyma farinosa
GNLVRS01_PISO0F02997g
I
0.639
DEHA2A12892g
Debaryomyces hansenii
DEHA2A12892g
I
0.639
GNLVRS01_PISO0J02957g
Millerozyma farinosa
GNLVRS01_PISO0J02957g
I
0.639
G210_0569
Candida maltosa
G210_0569
I
0.629
CTRG_00843
Candida tropicalis
CTRG_00843
I
0.629
CaO19.7800
Candida albicans
CaO19.7800
I
0.629
CD36_27510
Candida dubliniensis
CD36_27510
I
0.629
CaO19.166
Candida albicans
CaO19.166
I
0.629
PGUG_04028
Candida guilliermondii
PGUG_04028
I
0.627
PGUG_04028
Meyerozyma guilliermondii
PGUG_04028
I
0.627
YALI0_C22990g
Yarrowia lipolytica
YALI0_C22990g
I
0.604
CTRG_05934
Candida tropicalis
CTRG_05934
I
0.602
CANTEDRAFT_104606
Candida tenuis
CANTEDRAFT_104606
I
0.600
LELG_00217
Lodderomyces elongisporus
LELG_00217
I
0.597
CORT_0A02680
Candida orthopsilosis
CORT_0A02680
I
0.597
CPAG_01303
Candida parapsilosis
CPAG_01303
I
0.597
SAKL0E08998g
Lachancea kluyveri
SAKL0E08998g
I
0.574
Kwal_4754
Kluyveromyces waltii
Kwal_4754
I
0.574
TDEL_0C04480
Torulaspora delbrueckii
TDEL_0C04480
I
0.574
KLTH0G09108g
Kluyveromyces thermotolerans
KLTH0G09108g
I
0.574
NDAI_0B03850
Naumovozyma dairenensis
NDAI_0B03850
I
0.574
TBLA_0G02610
Tetrapisispora blattae
TBLA_0G02610
I
0.574
KUCA_T00002124001
Kuraishia capsulata
KUCA_T00002124001
I
0.574
KLTH0G09108g
Lachancea thermotolerans
KLTH0G09108g
I
0.574
KLLA0_F04609g
Kluyveromyces lactis
KLLA0_F04609g
I
0.574
KAFR_0J01710
Kazachstania africana
KAFR_0J01710
I
0.574
Kpol_1039p11
Vanderwaltozyma polyspora
Kpol_1039p11
I
0.574
LALA0_S04e08614g
Lachancea lanzarotensis
LALA0_S04e08614g
I
0.574
BN7_630
Wickerhamomyces ciferrii
BN7_630
I
0.574
10716_YIL130W
Saccharomyces paradoxus
10716_YIL130W
I
0.571
11848_Multiple
Saccharomyces bayanus
11848_Multiple
I
0.571
Scas_Contig662.8
Saccharomyces castellii
Scas_Contig662.8
I
0.571
SAKL0C03938g
Lachancea kluyveri
SAKL0C03938g
I
0.571
CAGL0G08844g
Candida glabrata
CAGL0G08844g
I
0.571
ASG1
Saccharomyces cerevisiae
YIL130W
D
0.571
SU7_1579
Saccharomyces arboricola
SU7_1579
I
0.571
KNAG_0E01760
Kazachstania naganishii
KNAG_0E01760
I
0.571
NCAS_0B06550
Naumovozyma castellii
NCAS_0B06550
I
0.571
TPHA_0F01380
Tetrapisispora phaffii
TPHA_0F01380
I
0.557
10452_Multiple
Saccharomyces mikatae
10452_Multiple
I
0.547
SCHCODRAFT_255656
Schizophyllum commune
SCHCODRAFT_255656
N
0.545
SPBR_04687
Sporothrix brasiliensis
SPBR_04687
N
0.539