SKUD_138701 (Saccharomyces kudriavzevii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SKUD_138701 T383869_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERT1
M00077_2.00 		Saccharomyces cerevisiae
NYCGGAAY
RTTCCGRN		 PBM
Badis et al.(2008)
YBR239C_2158 		0.683 1.000
ERT1
M01572_2.00 		Saccharomyces cerevisiae
NNCGGARNN
NNYTCCGNN		 PBM
Zhu et al.(2009)
Ybr239c 		0.683 1.000
ERT1
M07504_2.00 		Saccharomyces cerevisiae
DYCGGAAY
RTTCCGRH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0420.1 		0.683 1.000
ERT1
M08646_2.00 		Saccharomyces cerevisiae
DYCGGAAY
RTTCCGRH		 Misc
DeBoer et al.(2011)
YBR239C_564 		0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT42820 Zinc cluster 37 77

Links

Other Zinc cluster family TFs
Other Saccharomyces kudriavzevii TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1958_YBR239C Saccharomyces paradoxus 1958_YBR239C I 0.683
ERT1 Saccharomyces cerevisiae YBR239C D 0.683
2111_Multiple Saccharomyces bayanus 2111_Multiple I 0.683
SU7_0276 Saccharomyces arboricola SU7_0276 I 0.666
4840_YBR239C Saccharomyces mikatae 4840_YBR239C I 0.666
ZYRO0G21582g Zygosaccharomyces rouxii ZYRO0G21582g I 0.625
TDEL_0B04020 Torulaspora delbrueckii TDEL_0B04020 I 0.597
NDAI_0F02030 Naumovozyma dairenensis NDAI_0F02030 I 0.577
CAGL0K06985g Candida glabrata CAGL0K06985g I 0.556
TBLA_0D03550 Tetrapisispora blattae TBLA_0D03550 I 0.538