SKUD_176303 (Saccharomyces kudriavzevii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SKUD_176303 T383877_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CHA4
M00095_2.00 		Saccharomyces cerevisiae
NRGCGGRGAN
NTCYCCGCYN		 PBM
Badis et al.(2008)
CHA4_2113 		0.650 0.897
CHA4
M01588_2.00 		Saccharomyces cerevisiae
NNCGGVNNN
NNNBCCGNN		 PBM
Zhu et al.(2009)
Cha4 		0.650 0.897
CHA4
M07521_2.00 		Saccharomyces cerevisiae
RGCGGRGW
WCYCCGCY		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0283.1 		0.650 0.897
CHA4
M08678_2.00 		Saccharomyces cerevisiae
VNNNVVGGCGGARWTNNHVNN
NNBDNNAWYTCCGCCBBNNNB		 Misc
DeBoer et al.(2011)
YLR098C_844 		0.650 0.897
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT42657 Zinc cluster 44 82

Links

Other Zinc cluster family TFs
Other Saccharomyces kudriavzevii TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
16036_YLR098C Saccharomyces bayanus 16036_YLR098C I 0.680
14459_YLR098C Saccharomyces paradoxus 14459_YLR098C I 0.680
CHA4 Saccharomyces cerevisiae YLR098C D 0.650
14712_YLR098C Saccharomyces mikatae 14712_YLR098C I 0.603
TPHA_0C01080 Tetrapisispora phaffii TPHA_0C01080 I 0.573