SKUD_205109 (Saccharomyces kudriavzevii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SKUD_205109 T383901_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TBS1
M00076_2.00 		Saccharomyces cerevisiae
NNCGGNNNN
NNNNCCGNN		 PBM
Badis et al.(2008)
TBS1_2130 		0.658 0.925
TBS1
M01571_2.00 		Saccharomyces cerevisiae
NCGGNNNNN
NNNNNCCGN		 PBM
Zhu et al.(2009)
Tbs1 		0.658 0.925
TBS1
M07503_2.00 		Saccharomyces cerevisiae
CGGNTCCG
CGGANCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0404.1 		0.658 0.925
TBS1
M08645_2.00 		Saccharomyces cerevisiae
CGGNTCCG
CGGANCCG		 Misc
DeBoer et al.(2011)
YBR150C_552 		0.658 0.925
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT43757 Zinc cluster 106 149

Links

Other Zinc cluster family TFs
Other Saccharomyces kudriavzevii TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1615_YBR150C Saccharomyces paradoxus 1615_YBR150C I 0.675
1758_YLR377C Saccharomyces bayanus 1758_YLR377C I 0.659
676_Multiple Saccharomyces mikatae 676_Multiple I 0.658
TBS1 Saccharomyces cerevisiae YBR150C D 0.658