SU7_3433 (Saccharomyces arboricola)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SU7_3433 T384590_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RDR1
M00108_2.00
Saccharomyces cerevisiae
DCGGRWN

NWYCCGH
PBM
Badis et al.(2008)
RDR1_2112
0.566 0.784
RDR1
M01597_2.00
Saccharomyces cerevisiae
NCGGRWNN

NNWYCCGN
PBM
Zhu et al.(2009)
Rdr1
0.566 0.784
RDR1
M07535_2.00
Saccharomyces cerevisiae
WGCGGAAN

NTTCCGCW
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0360.1
0.566 0.784
RDR1
M08694_2.00
Saccharomyces cerevisiae
WTCCGCGGAR

YTCCGCGGAW
Misc
DeBoer et al.(2011)
YOR380W_756
0.566 0.784
RDR1
M08695_2.00
Saccharomyces cerevisiae
NNNNNNNNGCGGAWANNNNNB

VNNNNNTWTCCGCNNNNNNNN
Misc
DeBoer et al.(2011)
YOR380W_843
0.566 0.784
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJS41555 Zinc cluster 18 54

Links

Other Zinc cluster family TFs
Other Saccharomyces arboricola TFs

Invalid Input OrderBy

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action