PDR3 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YBL005W T388329_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables cupric reductase activity. Involved in several processes, including cellular copper ion homeostasis; nucleic acid metabolic process; and sexual sporulation resulting in formation of a cellular spore. Located in nucleus. Part of CENP-A containing nucleosome and replication fork protection complex. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PDR3
M00918_2.00		 Saccharomyces cerevisiae
NBCCGCGGRNN
NNYCCGCGGVN		 PBM
Gordan et al.(2011)
Pdr3		 (Direct) (Direct)
PDR3
M08438_2.00		 Saccharomyces cerevisiae
TCCGCGGA
TCCGCGGA		 ChIP-chip
Mathelier et al.(2014)
MA0353.1		 (Direct) (Direct)
PDR3
M08642_2.00		 Saccharomyces cerevisiae
NVCGGA
TCCGBN		 Misc
DeBoer et al.(2011)
YBL005W_1387		 (Direct) (Direct)
PDR3
M08643_2.00		 Saccharomyces cerevisiae
WCHGCGGN
NCCGCDGW		 Misc
DeBoer et al.(2011)
YBL005W_2062		 (Direct) (Direct)
PDR3
M11475_2.00		 Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$PDR3_Q2		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00918_2.00 Zinc cluster 13 51

DNA Binding Domains

Protein ID Domain From To Sequence
YBL005W Zinc cluster 13 51

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

Invalid Input OrderBy

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action