RDS1 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YCR106W T388336_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables sequence-specific DNA binding activity. Involved in response to xenobiotic stimulus. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RDS1
M00078_2.00		 Saccharomyces cerevisiae
GCGGCSGD
HCSGCCGC		 PBM
Badis et al.(2008)
RDS1_2068		 (Direct) (Direct)
RDS1
M01573_2.00		 Saccharomyces cerevisiae
NKCGGVNNNN
NNNNBCCGMN		 PBM
Zhu et al.(2009)
Rds1		 (Direct) (Direct)
RDS1
M07505_2.00		 Saccharomyces cerevisiae
CGGCCGV
BCGGCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0361.1		 (Direct) (Direct)
RDS1
M08648_2.00		 Saccharomyces cerevisiae
CGGCCGV
BCGGCCG		 Misc
DeBoer et al.(2011)
YCR106W_506		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00078_2.00 Zinc cluster 12 50
M01573_2.00 Zinc cluster 13 51

DNA Binding Domains

Protein ID Domain From To Sequence
YCR106W Zinc cluster 13 51

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

Invalid Input OrderBy

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action