CHA4 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YLR098C T388362_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CHA4
M00095_2.00		 Saccharomyces cerevisiae
NRGCGGRGAN
NTCYCCGCYN		 PBM
Badis et al.(2008)
CHA4_2113		 (Direct) (Direct)
CHA4
M01588_2.00		 Saccharomyces cerevisiae
NNCGGVNNN
NNNBCCGNN		 PBM
Zhu et al.(2009)
Cha4		 (Direct) (Direct)
CHA4
M07521_2.00		 Saccharomyces cerevisiae
RGCGGRGW
WCYCCGCY		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0283.1		 (Direct) (Direct)
CHA4
M08678_2.00		 Saccharomyces cerevisiae
VNNNVVGGCGGARWTNNHVNN
NNBDNNAWYTCCGCCBBNNNB		 Misc
DeBoer et al.(2011)
YLR098C_844		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00095_2.00 Zinc cluster 41 79
M01588_2.00 Zinc cluster 42 80

DNA Binding Domains

Protein ID Domain From To Sequence
YLR098C Zinc cluster 42 80

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

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7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action