CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZYRO0C13882g
(
Zygosaccharomyces rouxii
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
ZYRO0C13882g
T389281_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RSC3
M00082_2.00
Saccharomyces cerevisiae
GCGCGCGG
CCGCGCGC
PBM
Badis et al.(2008)
RSC3_2035
0.642
0.872
RSC3
M01576_2.00
Saccharomyces cerevisiae
NNNNNSCGNN
NNCGSNNNNN
PBM
Zhu et al.(2009)
Rsc3
0.642
0.872
RSC3
M07509_2.00
Saccharomyces cerevisiae
NNVCGCG
CGCGBNN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0374.1
0.642
0.872
RSC3
M08655_2.00
Saccharomyces cerevisiae
NNVCGCG
CGCGBNN
Misc
DeBoer et al.(2011)
YDR303C_580
0.642
0.872
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAR27310
Zinc cluster
15
54
PACVQCRKRKIGCDRVKPICSNCQKNGKSDCFYPDVPGQY
Links
Other
Zinc cluster
family TFs
Other
Zygosaccharomyces rouxii
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy